| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5079 |
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| Symbol | |
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| ID | 8547490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 7001330 |
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| End bp | 7003411 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646389755 |
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| Product | Integrin alpha beta-propellor repeat protein |
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| Protein accession | YP_003269460 |
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| Protein GI | 262198251 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTGCA CGAGTTCAAG ACACAAACGC ACGCATGCTG AGCCTACGCA TGCCCTCGCC
GTCGCGGCGG CAACCGGCGC CGCCCTCGCG CTGCTCAGCG GTTGCGCCCA GGTCCTGGGC
ATCGACGAGC TCTCGCCCGG AGCGGGCGCC GGCCGCGTTA CCCTGCGCGG CACGGCCAGC
GGCGTACTCG CGCCCGTGAG CCTGCGCCTC ACCCACCCCG GCGGCAGCGA GGAGCTGCGC
GTGGACGGCG ACGGCGCGTT CGGGTTTTCG ACCGAGCTGT CGAAGGGCGA CATCTACGAG
GTCGCGATCG CGGCCGCCGA GGACGCGCAG CCGTGCGCGC TCGACCACGC CGCGGGCACG
GCCGACAGCG ACGCGGACGA GTCGCAGCGC GGTCTCGAGC TGGCCTGTGG GCCAACGTTG
CTCACCGAGC TGAGCATCGC GGACGTGGAC GCGCTGCCGT TTGAGCTCGG ACGCGCGGAC
TATGACCTCA GCGTGCCGCT GCTGCAGCGC TCGCTGCAGA TCACGGCGGC GGCCGCGCAT
CCCGATGCCG AGCTGCGCAT CGACGGCACG CCGGTGGCCG CGGGCACACC TGGCCCGCCC
ATCGCGCTGC CCCTCGGCGC CAGCGAGATC GTGCTCGAAC TCGGCCTCGC CGGCGGCAGC
GCGCGCAGCT ACCGGCTGCA CGTAGCGCGC GAGGCCGCAG CCCTGCAGCG CGCCTACGGC
AAAGCGGAAA ACGGCGACGG CGAGGACGCC TTTGGCTTCA GCATGGACCT CGCCGGCGAG
CTCCTGGTCG TCGGCGCCCC CTACGAGGAC AGCGCCGCGC GCGAGGTCGA CGGCGACGGC
GACAGCGACG CAGCCAGCGA CAGCGGCGCG GTCTACATCT TCCGCCGCGA CGGCGAGAGC
TGGGTCGAGG AGGCCTATCT CAAGCCGCGC AACGGCGCCG CGGGCGACAA TTTCGGCCAC
TCGCTGGCCA TCTCGGGCGA TACCCTCGCG ATCGGCGCGC CCTTCGAGGA CAGCGCCGCG
CGCGGCTCCT TTGCCGACAG CGGCGCCGCC ACCGACGATG ACGCCGGCGA CAGCGGCGCG
GTCTACATCT TCGTCCGCGA CGGCGGGCGC TGGCGTGAAG ACGCCTATCT CAAAGCCCAC
AACGGCGACC CCGCCGACAA CTTCGGCTGG GCCGTGGACC TCGACGGCGA CACCCTGGCC
GTGGGCGCGC GCTTCGAGAG CGGCGGCACG ACCGGCGTCG GCGGCGGCAG CGACGGCCTC
GATGACGAGC GCGTCGGCAA GAGCGGCGCG GTCTACGTGT TTCACCGCGA TGGCGGCTGG
CAGCAAGAGG CCTACGTCAA AGCCTCCAAC ACCGGGCGCG AGGACAATTT CGGCCGCAGC
CTCAGCCTCG ACGGCGACAC CCTCGCGGTC GGCGCCCGCT TCGAGGACAG CGACGGCGCC
GGCGTCGATG GCGCCCAGGA CAACGACGCT CGCGTCAACA GCGGCGCGGT CTACGTGTTT
CGCCTCGCCC GCGGACGCTG GGCGCAAGAG GCGTACCTCA AAGCCTCGAA CCCCGCCTTC
GAGGACAACT TCGGCCTCAG CCTGGCGCTC GCCGGCGACC TCCTGGCGGT GTCCGCGCCC
TACGAGGACA GCGCGGCCAC CGGCGTCGAT GGTGACCAGG GCGACGACTC AGCCGAAGAC
AGCGGCGCCG TGTACCTATT CGAGCGCAGC GATAGCACCT GGAAACAGGC AGTTTATCTC
AAAGCTAGTA ATTCCGGCCA GGGGGACAAT TTCGGTTGGA GCCTGGACGC GGCCGGTGAC
CTGGTCGCCA TCGGCGCGCT CGGCGAGTCC GGCGTCGACG ACGGCAGCCC GCAGGGCGGC
GCCGCCTACC TGCTCGGACG CGACGAGCGC GGCTGGCGCG AGTTCGACCT GCTGCGGGCC
TCCAACGCCG AGGAATACGA CTGGTTCGGA TATGCCGTCG CGTTGGGCGA AGGCCGACTC
GTTGTCAGCG CTCGCGACGA GGACAGTGCA TCTCAGGGCT GGGACGGCGA GCAGACCAAT
AACAGTGCCG CCAACAGTGG GGCGGTTTAC GGATACGAGT GA
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| Protein sequence | MMCTSSRHKR THAEPTHALA VAAATGAALA LLSGCAQVLG IDELSPGAGA GRVTLRGTAS
GVLAPVSLRL THPGGSEELR VDGDGAFGFS TELSKGDIYE VAIAAAEDAQ PCALDHAAGT
ADSDADESQR GLELACGPTL LTELSIADVD ALPFELGRAD YDLSVPLLQR SLQITAAAAH
PDAELRIDGT PVAAGTPGPP IALPLGASEI VLELGLAGGS ARSYRLHVAR EAAALQRAYG
KAENGDGEDA FGFSMDLAGE LLVVGAPYED SAAREVDGDG DSDAASDSGA VYIFRRDGES
WVEEAYLKPR NGAAGDNFGH SLAISGDTLA IGAPFEDSAA RGSFADSGAA TDDDAGDSGA
VYIFVRDGGR WREDAYLKAH NGDPADNFGW AVDLDGDTLA VGARFESGGT TGVGGGSDGL
DDERVGKSGA VYVFHRDGGW QQEAYVKASN TGREDNFGRS LSLDGDTLAV GARFEDSDGA
GVDGAQDNDA RVNSGAVYVF RLARGRWAQE AYLKASNPAF EDNFGLSLAL AGDLLAVSAP
YEDSAATGVD GDQGDDSAED SGAVYLFERS DSTWKQAVYL KASNSGQGDN FGWSLDAAGD
LVAIGALGES GVDDGSPQGG AAYLLGRDER GWREFDLLRA SNAEEYDWFG YAVALGEGRL
VVSARDEDSA SQGWDGEQTN NSAANSGAVY GYE
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