| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_5062 |
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| Symbol | |
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| ID | 8547473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 6981794 |
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| End bp | 6982957 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646389738 |
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| Product | acyl-CoA dehydrogenase domain protein |
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| Protein accession | YP_003269443 |
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| Protein GI | 262198234 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.721342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTTC CACACAGTTT TGAAGATTCC CTGTGCAATC CTAGCGAAGA GCACGCGATG
CTGCGTCAGA CCGTGCGCGA GTTTACGCGC AAGGAGGTCG AGCCCCAGGC CGAGCAGCAC
GATCGCTCGG CCACCCTCAA CGTGGGACTG CTGCGCGAGC TGGGCAAACT CGGCCTGCTC
GGCATCACCA TCCCCGAGGA GGCGGGTGGC GCCGGCATGG ACGCGGTGGC CTCGGTGCTG
GTGCATGAGG AGCTCTCGTA TTCCGACCCG GGCTTCGCGC TGGCGTATTT GGCTCACTCG
CTTTTATTCG TCAACAATCT ATATTTTGCC GCCAACGACG AGCAGCGCGC GCGCTACCTG
CCCAGGACCC TCACGGCCGA GCACGTCGGC GCCATGGGCA TGACCGAGCC GGCCGTCGGC
ACCGACGTGC TGGGTATGCG CACCAGCGCG CGCCGCACCG ATGATGGCTA CGTGCTCTCG
GGCCACAAGA CCTTCATCAC CAACGCCCCC GAGGCCGAGG TCTTCGTGGT CTACGCGCAG
CTCGACAAGC GCCTCACCAC CTTTGTGGTC GAGCGCGGTA TGTCCGGGTT CTCGGTGAGC
GACAAGATTC CCAAGATGGG TATGCGGGCC TCGACCATGG CCGAGTTGGT GTTCGAGGAC
GTGCGCGTCC CGGCCGCCAA CCTGCTCGGC AAAGAGGGCG GCGGCATCAC CAACATGATG
CGCAACCTCG AGATCGAGCG CCTGGGTCTG GCGGCCATGA GCCTGGGCAT CGCCAATCGC
TGTCTCGACG TCATGGTGCG CTATAGCTCC GAGCGCGAGG CCTTTGGCAA GCCCATCTCG
GATTTCGGCC AGATCCAGCG CTACATCGGC GAGAGCTACG CCAAGGTCGA GGCCATCCGC
GGCCTGCTCT ACGGCGTCGC GCGCACGGTC TCGCACGGCA GCCGCAACCG CCTGGGCACC
GACGCGGTCA AGCTGTTCGC GGCCACCGCG GCCAAGGAGG TCGCGGACGC CGCGGTGCAG
GTGCTCGGCG GCTACGGCTA CTGCGCCGAG TATCGCGTCG AGCAGTTTCT GCGCGACGCC
AAGCTCATCG AGATCGGCGG CGGCACCATC GAAGCCCACC AGAAGAACAT CACCCGCGAC
CTCATCAAGC AGCTACGCGG CTGA
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| Protein sequence | MPVPHSFEDS LCNPSEEHAM LRQTVREFTR KEVEPQAEQH DRSATLNVGL LRELGKLGLL
GITIPEEAGG AGMDAVASVL VHEELSYSDP GFALAYLAHS LLFVNNLYFA ANDEQRARYL
PRTLTAEHVG AMGMTEPAVG TDVLGMRTSA RRTDDGYVLS GHKTFITNAP EAEVFVVYAQ
LDKRLTTFVV ERGMSGFSVS DKIPKMGMRA STMAELVFED VRVPAANLLG KEGGGITNMM
RNLEIERLGL AAMSLGIANR CLDVMVRYSS EREAFGKPIS DFGQIQRYIG ESYAKVEAIR
GLLYGVARTV SHGSRNRLGT DAVKLFAATA AKEVADAAVQ VLGGYGYCAE YRVEQFLRDA
KLIEIGGGTI EAHQKNITRD LIKQLRG
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