Gene Hoch_5055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5055 
Symbol 
ID8547466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6972124 
End bp6973788 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content68% 
IMG OID646389731 
Productcarboxyl transferase 
Protein accessionYP_003269436 
Protein GI262198227 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.433774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGG CCCCTTACCC GCTCCTATCC AGCAGCGTCG ATCGCGACGC AACGGCGTTT 
CGCGACAACG ACGCCGCCAA TCGCCGCGCC CTTGACGAGA TCGAGGCCGC GCTCGCTGAA
GCCCGCGCCG GCGGCGGCGA TAAATACAAC CAGCGGCATC TGGCCGCGGG CAAGCTCCTG
CCCCGCCAGC GCATCGAGCT GCTGCTCGAC CGCGACTCGC ACTTCCTCGA GCTGTGTCCG
CTGGCCGGCT ATCGCGTGCC CAGCCACGCG CCCGGCGCCA GCATGGTCGC CGGCATCGGC
GTGGTCTCCG GCGTCGAGGT GCTGATCTCG GCCAGCGAGG CCACGGTCAA GGGCGGCGCC
ATCGGCGAGC TGGGCGTGCG CAAAACCGCC CGCATGGCCG AAATAGCCGA GCAGAACCGG
CTGCCCACGA TCAACATGAT CGAGTCGGCC GGCGCCGACC TGCCCAATCA GAGCAAGATC
TTCGTCCCTG GCGGCGCCGG TTTTCGCGAC CTCACGCGGC GCTCGCGCGA GCGCATCCCG
ACCGTGTGCT TGGTGTTCGG CAGCTCGACC GCAGGCGGCG CCTACATCCC GGGCATGAGC
GACTACGTGG TGATGGTCGC CGAGCGCGCG CAGGTGTACC TGGCGGGTCC GCCGCTGGTC
AAGATGGCCA CCGGCGAGGA CGCCGACGCC GAGTCCCTGG GCGGCGCCGC CATGCACAGC
CGCACCTCCG GGGTGTCCGA TTTCCTGGCC GAGAGCGAGC ACGACGCCAT CCGCCTGGGC
CGCGAGATCG TCGCTCACCT GAACTGGCGC AAACGCGGAC CAGAACCCGA ACGCCTGTCC
GAGCAAGGGT TTGCGTCCGC TGGTCCGACA ATGGGCCCAG GCGCGGCGAT CGAAGCCCCG
CGCTACGACC CCGAGGAGCT GCTCGGCATC GCCTCGGCCG ACATCAAGGT GCCCTTCGAG
GCCCGCGAGG TCATCGCCCG CATCGTCGAT GGCTCGCGCT TCTCGGAGTT CAAGCCGCAG
TACGGCAGCA CCCTGGTGTG CGGCTGGGCG CGCGTGCACG GCTACCCGGT CGGCATCCTG
GCCAACAACG GCATCCTGTT CTCCGAGTCG GCCAACAAAG GCGCGCAGTT CATCGCCCTG
TGCAACCAGA GCGATATCCC GCTGCTGTTC CTGCAGAACA TCACCGGTTT CATGGTCGGC
ACCCGCTACG AGCAAGAGGG CATCATCAAG AACGGCGCCA AGCTGATCAA CGCGGTCTCG
AATAGCACGG TCCCGGCCAT CACGATCATG ACCGGGGCCA GCTTTGGCGC CGGCAACTAC
GGCATGTGCG GCCGGGCGTA TGAGCCGCGC TTCCTGTTCT CGTGGCCCAA TCACCGCATC
GCCGTGATGG GCGGCAAGCA GCTCGGCGGC GTCCTCGAGA TCATCCAGCG ACAGGCGGCG
GCCAAGAAAG GCAGGGAGGT GGATGAAAAG GGCCTGAGCG TGGCCAAGGC CATGATCGAG
TCGCAGATCG AGCGCGAATC GACTCCCCTA TTTGCCACCG CGCGGCTGTG GGATGATGGC
ATCATCGATC CTCGACATAC CCGCGAAGTG GTCGCCATCA GCTTGTCGGC CGCCCACTCG
GCCCCGGTGC GCGGCACCAT GGCCTGGGGC GTGTACCGGC ATTGA
 
Protein sequence
MPAAPYPLLS SSVDRDATAF RDNDAANRRA LDEIEAALAE ARAGGGDKYN QRHLAAGKLL 
PRQRIELLLD RDSHFLELCP LAGYRVPSHA PGASMVAGIG VVSGVEVLIS ASEATVKGGA
IGELGVRKTA RMAEIAEQNR LPTINMIESA GADLPNQSKI FVPGGAGFRD LTRRSRERIP
TVCLVFGSST AGGAYIPGMS DYVVMVAERA QVYLAGPPLV KMATGEDADA ESLGGAAMHS
RTSGVSDFLA ESEHDAIRLG REIVAHLNWR KRGPEPERLS EQGFASAGPT MGPGAAIEAP
RYDPEELLGI ASADIKVPFE AREVIARIVD GSRFSEFKPQ YGSTLVCGWA RVHGYPVGIL
ANNGILFSES ANKGAQFIAL CNQSDIPLLF LQNITGFMVG TRYEQEGIIK NGAKLINAVS
NSTVPAITIM TGASFGAGNY GMCGRAYEPR FLFSWPNHRI AVMGGKQLGG VLEIIQRQAA
AKKGREVDEK GLSVAKAMIE SQIERESTPL FATARLWDDG IIDPRHTREV VAISLSAAHS
APVRGTMAWG VYRH