Gene Hoch_5017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_5017 
Symbol 
ID8547427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp6921962 
End bp6922777 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID646389693 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003269399 
Protein GI262198190 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.893177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0203329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGC TTGTCAGCGA TGATGTCTTC GAACGCACCG CGCAGCTCGA GGTCCCCTTC 
AGTCGGCACG GTATCGATCC ATTCGGCATC TCGCGGGTCG AAGTCGCGCG CATGATGACG
GTGCTTTCGT GGCTGTATCG CCACTACTTC ACCATGCGCG TGAGCGGCCT CGACAACGTC
CCCGACCACG GCCGCGTGCT CCTGATCGGC AACCACTCGG GCGGCTGGGG CGTGGACGCG
ATGATGACCA TCGCCGCGCT GTTTCTCGAG AAGGAGCCGC CGCGCCTGGC CCACGCCATG
GCTGATCGCT TCATCAACCG CATGCCCTTC GCCTCGCTGT ACACGGCGCG TACCGGCAAC
CTCACCGGCA CCCCGCGCAC GGCCGCGATG CTGCTCGAGA GCGAGCGCGC GCTGATGGTC
TTCCCCGAGG GCTGGCGCGG CACCGCCAAG CTCTACGGCG ACCGCAACAG CCTGGTGCGC
TTCGGCAACG GCTTCATGCG CCTGGCCCTG CACACCAAGA CCCCGATCGT GCCCTTCGCC
TTCGTCGGCG GCGGCGACGC CATCCCGACC GTGGTCAACT TGTACCGCGT GGGCAAGCTC
CTGGGCATGC CGTACATCCC GATCACGCCC TACGTGCTGC CGCTGCCGCG GCCGGTGGCG
CTGCAGCTCA ACTTCGGCGA GCCCATGCAC TTCGCGGGTA CCGGCAACGA GGACGATCAC
GAGGTCGCCA CCTACGTCGG CGAGGTCAAG AACCGCATCG CGGTCATGCT CGAGAACGGC
CAGCGCCGCC GGCTGGCGAA AGGACTGGGA CGATGA
 
Protein sequence
MPWLVSDDVF ERTAQLEVPF SRHGIDPFGI SRVEVARMMT VLSWLYRHYF TMRVSGLDNV 
PDHGRVLLIG NHSGGWGVDA MMTIAALFLE KEPPRLAHAM ADRFINRMPF ASLYTARTGN
LTGTPRTAAM LLESERALMV FPEGWRGTAK LYGDRNSLVR FGNGFMRLAL HTKTPIVPFA
FVGGGDAIPT VVNLYRVGKL LGMPYIPITP YVLPLPRPVA LQLNFGEPMH FAGTGNEDDH
EVATYVGEVK NRIAVMLENG QRRRLAKGLG R