| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4942 |
|---|
| Symbol | |
|---|
| ID | 8547350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 6816250 |
|---|
| End bp | 6817749 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646389616 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003269324 |
|---|
| Protein GI | 262198115 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.550155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.968194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGC CCCTCTACCG GCGCCCCGCC GTCGCGGTGT TCGCGCTCTG CTTCGCCTGC
TACGCGTATT TCTACCAGGC CGGCGGCTGG AACCAGAACG TGCGCTTCGA CCTGGTGCGG
AGCTGGGTCG AGCAGGGCTC GGCGCGCATC GACTCGTTCT ATCGCAACAC CGGCGACCTG
GCCTGCCGCG GTCCGCAGGG GCGCTGCCTC AGGCCCGCGC CCGCGCAGGG CAAGCACGCC
TACGCCGACA AGGCACCGGG GGTGTCGATG CTGGCGGTCC CGGCCCACGC CGCCGTGCAC
GCGCTGCGCG GCGACGGTCC CGCGGGCCCG CGCTATCTCG ACACCGCCGC GTACCTGAGC
ACGCTGTGGG CTATCGCCCT GCCCTCGGCG CTGTCGGTGG CGCTGCTGTG CGGCCTGCTG
GGAGCGCTGG GCCTGGGGGC GGGCGCGCGC GTGGCCTTTG CCCTGGCCTA CGGCCTGGCC
ACGCTGGCGT TTCCCTACGC CACCCTGCTC TACGGCCACC AGCTCACGGC CGCGCTGCTG
CTCATGGCCT TCGCGGTGCT GGTGCGCGCT CGTCATGACC AGGTAGGGCT CGGCCGCGGC
GCGCTGTTCG GGGTCGGCGC GCTGCTGGGC GCGGCCGTGC TGGTCGAATA CCCGGCCGCG
CTCGCGGTGC TGCCGATCTG CGTCTACGCG CTGGCGTTTG TGCGCCCGCT GCCGCGCCTG
GGCTGGCTGC TCGCGGGCGG CGCGCTGGCG GCCGCGGTGC TCGCCGGCTA CCACGCGCTG
GTGTTCGGCG GGCCGCTCAC CCTGCCCTAC GAGTTCTCGA CCCAGCCGCA CCGCAGCCAG
GGGTTCTTCA TGGGTCTGGG CATGCCCGAG CCAGCGGCGG TCAGCGGCAT CCTGGTGTCG
TCGTATCGCG GGCTGCTGTT CAGCGCGCCG TGGCTGCTGC TGGCGCTGCC GGGCGCCGTG
GTGCTGGCGC GACGTTCCGG GCTGCGCGCC GAGCTGGCGG TGTGCGCCGT GATCTTCGCG
CTCTTTGTCT GGCTCAACGC CTCGCTGGTC GACTGGCAGG GCGGCTGGGC GCTGGGGCCG
CGCTACCTGG TGCCGGCGCT GCCCTTCGTC GCGGTGCTGG CCGCGGCCAT GGCCCTGGTG
CCGGCGCCCG CGGCGCTGCG CGCGCTGGGC TGGCTGGTGT TCGCGGCGCT GAGCGGCTAC
GCCGCCTACC TGATGCTGGT CGGCACCGCG GTCAAACCCG AGGTGCCCGT GTACGTCGCC
GAGCCCTTTG CCGACTACCT GCTGCCGCGC TTCGCCGCCG GCGATCTCGC GGTCAATACC
CAGAGCATCG ACGCCATCGG CGCCTCGCCG CGGGGCGAGC GCTTCGCCTG GAACCTGGGC
CAGCTCCTGG GTCTGCGCGG CCGGCTGTCG CTGCTGCCGC TGGCCGCGCT GGTGCTCGCG
CTCGGCGCCT GGCTGGTCGC GTGCGTGCGC GCTCAGCGCC GCAGCGAGCA CGACGCGTAG
|
|---|
| Protein sequence | MATPLYRRPA VAVFALCFAC YAYFYQAGGW NQNVRFDLVR SWVEQGSARI DSFYRNTGDL
ACRGPQGRCL RPAPAQGKHA YADKAPGVSM LAVPAHAAVH ALRGDGPAGP RYLDTAAYLS
TLWAIALPSA LSVALLCGLL GALGLGAGAR VAFALAYGLA TLAFPYATLL YGHQLTAALL
LMAFAVLVRA RHDQVGLGRG ALFGVGALLG AAVLVEYPAA LAVLPICVYA LAFVRPLPRL
GWLLAGGALA AAVLAGYHAL VFGGPLTLPY EFSTQPHRSQ GFFMGLGMPE PAAVSGILVS
SYRGLLFSAP WLLLALPGAV VLARRSGLRA ELAVCAVIFA LFVWLNASLV DWQGGWALGP
RYLVPALPFV AVLAAAMALV PAPAALRALG WLVFAALSGY AAYLMLVGTA VKPEVPVYVA
EPFADYLLPR FAAGDLAVNT QSIDAIGASP RGERFAWNLG QLLGLRGRLS LLPLAALVLA
LGAWLVACVR AQRRSEHDA
|
|---|
| |