| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_4862 |
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| Symbol | |
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| ID | 8547269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 6712613 |
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| End bp | 6714166 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646389535 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003269244 |
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| Protein GI | 262198035 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0750555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGTAC GACGATCCAT ATGCACCGCC ACCTGCGCCC TGCTGCTGGC GGGCTGCGCG
CCGCGCGTCT CCGAGCCCGA ACTGCCGGCC GCGGCTACCG CTGCGGCGTT CTCTCGCTCG
GGTGAGGCGG CGCCGGCCGA ACGCTGGTGG ACGGCGTTTG ACGACCGCGC GCTCGACGCG
CTGGTGGCAG AGGCGCTGCG CACAAACTTC GACCTGCAGA TCGCCTGGGA ACGCCTGCGG
GAGGCCCGCG CCGTGGTCGC GGGCGCTTCG GCGTCGCTGT TCCCCGAGAT CACGGGCTCG
GCTGCGGCGG AGCTGGTCTA CCCGCGCGGC CCGGACGATG CGCTGCTGTC GCTGGCGCTC
AGCGCGAGCT ACGAGCTCGA TCTCTGGGGC CGGCTGGGCT CGCGGGTCGA GGCCGAGCGC
TACCGCGCCC GCGCCAGCCT CGCCGACTAC CGCACGGCCG CGCTGTCGCT CTCGGCCGAG
ATCGCCCAGA CCTGGTATCG GCTGCTCGAG GCGCGCGCCC AGGTGCTCCT GCTCGCCGAA
CAGGTGGAGG CCAACGAGCG GGTGCTGCGC CTGCTCCGCA GCCGCTTCGG CAGCGGCCAG
GTCCGCAGCG TCGACCTGCT CCGGCAACAG CAGCTCATCG AGGCGACGCG CGCGCAACAG
GCGAGCGCGG TGGCCGATGT GCAGGTGCTC TTGCATCAGC TCAGCGCGCT CGTCGGCCGC
GCGCCGCAGC GCGGCGTGGC CGACCTGGTC GGCGCGGAGC TCGCGCTGTC TGCGGTGCCC
GCGAGCGGCC CACCAGCGAA CGCAGATGCA GACGCTGCCG CAGCTACAGG CGCAGATGCA
GACGTTGCCG CAGACGCGGA CGCGGACGCG GACGCGGGCA GCGTCGAGGG CGCCGCGGAG
CCCGATGCCG CGGCTGCGCG CCCGGCTCCC GAGGGTCCGC CGCTGCCGCC GCTGCCGCCG
CTGCCGGCCA CGGGCGTGCC CGGCGAGCTG CTGCAGCGCC GCCCCGATGT CCAGCGCGCC
TATCTGTCGC TGCTGGCCGC GGACCGCGAC ATGGCCGCGG CGGTGAGCGA CCGCTACCCG
CGGCTGTCGC TGTCGGCGTC GCTGGGCACC CGCGGCAGCT CGGCCAGCGA GCTGTTCGAG
GGCTGGTTCG CGTCGCTGGC GGCCAATCTG CTCGCGCCGC TGTTCGATGG CGGCGCGCGC
CAGGCCGAGG TCGAGCGCAC CAACGCGATC AAGCGACAGC GGCTGTACGC CTACGGCCAG
ACCGCGCTGC TGGCGTTTCG CGAGGTCGAG GACGCGCTGG TGCAGGAGGC GCAACAGCGC
GAGCGCATCG CCCGACTCGA GGAACAGGCG CGGCTGGCCC GGCTCACCTA TGAACAACTT
CAGATCGAAT ATCTCAACGG CTTGAGTGAC TACATCGACG TGCTCACCGC GCTCACCGAC
GAGCAGCAAC TGCGGCGCGA ACTCCTGCTC TCGCGGCGCG CGCTGCTCGA GTTCCGGATC
GCCCTGTACC GCGCTCTGGC CGGCGGCTTC GAGACAGCGA GGGAATCGAA ATGA
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| Protein sequence | MFVRRSICTA TCALLLAGCA PRVSEPELPA AATAAAFSRS GEAAPAERWW TAFDDRALDA
LVAEALRTNF DLQIAWERLR EARAVVAGAS ASLFPEITGS AAAELVYPRG PDDALLSLAL
SASYELDLWG RLGSRVEAER YRARASLADY RTAALSLSAE IAQTWYRLLE ARAQVLLLAE
QVEANERVLR LLRSRFGSGQ VRSVDLLRQQ QLIEATRAQQ ASAVADVQVL LHQLSALVGR
APQRGVADLV GAELALSAVP ASGPPANADA DAAAATGADA DVAADADADA DAGSVEGAAE
PDAAAARPAP EGPPLPPLPP LPATGVPGEL LQRRPDVQRA YLSLLAADRD MAAAVSDRYP
RLSLSASLGT RGSSASELFE GWFASLAANL LAPLFDGGAR QAEVERTNAI KRQRLYAYGQ
TALLAFREVE DALVQEAQQR ERIARLEEQA RLARLTYEQL QIEYLNGLSD YIDVLTALTD
EQQLRRELLL SRRALLEFRI ALYRALAGGF ETARESK
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