| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3938 |
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| Symbol | |
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| ID | 8546334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5431540 |
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| End bp | 5432610 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 646388610 |
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| Product | pyrimidine utilization protein A |
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| Protein accession | YP_003268330 |
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| Protein GI | 262197121 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR03612] pyrimidine utilization protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.252871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0210815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTCG GAGTGTTCAT CCCCATCGGC AACAACGGCT GGCTGATCTC GGAGAATTCG
CCCCAGTACC AGCCGAGCTT CGACCTGAAC AAGGAGATCG CGCAGCGGGC CGAGGCCCAC
GGTCTGGATT TCTTGCTGTC GATGATCAAG CTGCGCGGCT TCGGCGGCAA GACCGAGTTC
TGGGAGTACA ACCTCGAGAG CTTCACGCTG ATGGCGGGTC TGGCCTCGGT CACCGAGCGC
ATCAAGCTGT TCGCGACCTG TGCCACGCTG CTCATCCCGC CGGCCTACGC GGCGCGCATG
TGCAACACCA TCGACTCGAT CAGCCACGGC CGCTTCGGGC TCAACCTGAT CACGGGCTGG
CAGCGGCCCG AGTACTCGCA GATGGGTATG TGGCCGGGCG ACGAGCACTT CGCGCGGCGT
TACGACATGC TGTCCGAATA CGCGCATATC CTGCGCGAGC TGTGGGAGAA GGGCGAGAGC
AGCTTCCAGG GCGAGTTCTA CCAGATGGAG GATTGTCGGG TGCGGCCGCA GCCGCAGGGC
GACATGAAGC TCATCTGCGC GGGCAGCTCG GACGCGGGCC TGGCGTTCTC GGCCAAGTAC
GCGGACTACG CGTTCTGTCT GGGCAAGGGC GTGAACACGC CGACGGCGTT CGCGGGCAAC
AACGAGCGCC TGGCGGCGGC GACGGCCAAG ACCGGGCGCG ATGTGTCGAT CTATGTGCTG
ATGATGGTGA TCGCGGCGGA GACCGACGAC GAGGCCATGG ACAAATGGAT GCACTACCGC
GCGGGCGTGG ACGAGGAGGC GGTGGCGTGG CTGGGCAACC AGGGCGCGGC CGACAAGACC
TCGGACACGA CCAACGTGCG CCAGCTCGCG GCCCGCGAAT CGGCCGTGAA CCTCAACATG
GGCACGCTGG TGGGCTCGTA CGAGAACATC GCGCGCATGC TCGACGAGGT CGCGACCGTG
CCCAACACCG GCGGCGTGCT GCTGGTGTTC GATGATTTCG TCGCGGGCGT GGAGACCTTT
GGCACGCGCA TTCAGCCGCT GATGAAGACC CGCCAGCACA CGGCGGGCTG A
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| Protein sequence | MEVGVFIPIG NNGWLISENS PQYQPSFDLN KEIAQRAEAH GLDFLLSMIK LRGFGGKTEF
WEYNLESFTL MAGLASVTER IKLFATCATL LIPPAYAARM CNTIDSISHG RFGLNLITGW
QRPEYSQMGM WPGDEHFARR YDMLSEYAHI LRELWEKGES SFQGEFYQME DCRVRPQPQG
DMKLICAGSS DAGLAFSAKY ADYAFCLGKG VNTPTAFAGN NERLAAATAK TGRDVSIYVL
MMVIAAETDD EAMDKWMHYR AGVDEEAVAW LGNQGAADKT SDTTNVRQLA ARESAVNLNM
GTLVGSYENI ARMLDEVATV PNTGGVLLVF DDFVAGVETF GTRIQPLMKT RQHTAG
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