| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3937 |
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| Symbol | |
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| ID | 8546333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5431099 |
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| End bp | 5431491 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646388609 |
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| Product | pyrimidine utilization protein C |
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| Protein accession | YP_003268329 |
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| Protein GI | 262197120 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative
[TIGR03610] pyrimidine utilization protein C |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.166806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0174959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCATGA AACCCATCAA TCCGTCGCAG TTTCCCAAAC CCATCGCGCC CTACTCGGCC
GGCGCCATGG CCGACAACGT GGTCTACGTG TCGGGCACCC TGGCGCTGGG CGAAGGCGGC
CAGGTGCTGC ACGTCGGCGA CGCCAAGGCG CAGACGCGGC ACGTGCTCGA GACCATCAAG
ACCACGCTCG AGGCCGCGGG CGGCGGCATG GCCGACATCA CCTTCAACCA CATCTTCGTC
AAGAGCTGGG ACGACTACAA GGCCATCAAC GAGGTCTACG CCGAGTACTT CCCGGGCGAC
AAACCGGCCC GCTACTGCAT CCAGTGCGGT CTGGTGAAGC CCGAGCTGCT GGTCGAGATC
GCCAGCATCG CGCACCTGAG CCCGAAAGAG TGA
|
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| Protein sequence | MPMKPINPSQ FPKPIAPYSA GAMADNVVYV SGTLALGEGG QVLHVGDAKA QTRHVLETIK
TTLEAAGGGM ADITFNHIFV KSWDDYKAIN EVYAEYFPGD KPARYCIQCG LVKPELLVEI
ASIAHLSPKE
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