Gene Hoch_3919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3919 
Symbol 
ID8546315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5402505 
End bp5403026 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID646388591 
Producthypothetical protein 
Protein accessionYP_003268311 
Protein GI262197102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.183613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA AAACCATCCC TGCCATCACC GCCCTTGCCC TGCTGGCGCT CGCGCCCGCC 
TGCGGAGGAG AAGACGATCA CGAAGAGCCC ATCGACCCCA GCGAGGACGC CTGCGAGCAC
ATGATCGAAG GCCCGGTCGA GAGCGCCACC GCCATCGACG ACATGAGCGC TGACGCCCCC
GACATCGGCG AGCATCACAC CCGCTTCGAC GTCACCCTGG TCGGCGACCA GAGCAACCCG
GGCAGCTACG TCGGCTACGT CGACCTGGTG GTCGAAGAGA CCGGCGAGAG CCTGATCTTC
CTCGACGCCG ATGTGCCCAT GCAGCTCTGG ACCGCGGCCG GCGACGAGGT CGAGGTCGAG
GCCACCAGCA ACGCCATCGA CGCCTGCACC GAGGTCGCCA TCAGCTACAC CTACGACCTC
GAGGTCGGCA CCTACCTGAT GCAGCTCGGC TCCACCAGCG CGGATCAGGT CGGCATCGTC
GTGGTCTTGG CCGGCGAGCA CGACCACGAC CACGATGAGT AG
 
Protein sequence
MKIKTIPAIT ALALLALAPA CGGEDDHEEP IDPSEDACEH MIEGPVESAT AIDDMSADAP 
DIGEHHTRFD VTLVGDQSNP GSYVGYVDLV VEETGESLIF LDADVPMQLW TAAGDEVEVE
ATSNAIDACT EVAISYTYDL EVGTYLMQLG STSADQVGIV VVLAGEHDHD HDE