| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3908 |
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| Symbol | |
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| ID | 8546304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5392377 |
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| End bp | 5393507 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646388580 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003268300 |
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| Protein GI | 262197091 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGCA AGCGACACGA CGAAGGCGCG GCCGGCGAGG CCGGCGCACG CTCCGGGGCC
CAGCGCCCGA CGCGCGCGCG GCGCGAGACC CGGGAGACCC GCAGCGACAG CGAGCTGGCG
CCGGACGAGC GCGGCGGCGA GGGCCGCTTT CAGGGCGCGC TGCGGCCGCA GCGCTTCGAC
GATTATGTCG GACAGCCGGA CATCATCGCC AACCTGCGGG TGTCGGTGAG CGCGGCCAAG
CAGAACGGCT GGGCGCTCGA TCACTTCCTG TTCGCCGGGC CGCCCGGCCT GGGCAAGACC
ACGCTGGCGC ACGTCATCGC CAACGAGCTG GGCGTGGGCG TGCACGTGAC CAGCGGGCCG
GCGATCGACC ACAAGGGCAT GCTGGCCAGC TTGCTCACCG CCCTGGGCGA GGGCGACGTG
CTGTTCATCG ATGAGATCCA CCGCCTCAAT CCCGTGGTCG AGGAGAACCT CTACCCGGCG
ATGGAGGACT TCAAGTTCGA CCTGTTCATC GGCGACGGCC CCCACGCCAA GGCCGTGACC
ATGAACCTGC CGCGCTTCAC GCTGCTGGGC GCGACCACGC GCATGGGTCT GCTGAGCTCG
CCGCTGCTCG ACCGCTTCGG CTTCCACTGG CAGCTCGGCT ACTACGACCT GAGCGAGATG
GCCGCGATCG TGGCCCGCTC GGCGCAGGTG CTCGGGGTCG GCATGGAGGA CGGCGGCGCG
CTCGAGATCG CGCGGCGCTC GCGCGGCACG CCGCGCATCG CCAACCGCCT GCTGCGCCGG
GTGCGCGACT TCGCCACGGT CGAGAGCTCG GGCGTCATCG GCGGCAAGCT GGCGGCGGCG
GCGCTGGATC GCCTGAGCGT GGACCACGCC GGGCTCGATG CGCTCGATCG CGCGTATCTC
ACGGTGGTGG TCGAGCGCTT CGACGGCGGG CCCGTGGGCG TGGACGCGAT CGCGGCGTCG
ATGAGCGAAG AGCGCGGCAC GCTCGAGGAT GTGGTCGAGC CGTTCCTGCT GCAGGCCGGG
TTCATCACCC GCACGCCGCG CGGTCGCATG GCCACGGCGG CCGCGTTCCG GCATCTGGGC
GTGCGCGCGC CCGGTCGCGT GCCCACCGGC GGGCCGCTGC GCTCGGTGTA G
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| Protein sequence | MGRKRHDEGA AGEAGARSGA QRPTRARRET RETRSDSELA PDERGGEGRF QGALRPQRFD
DYVGQPDIIA NLRVSVSAAK QNGWALDHFL FAGPPGLGKT TLAHVIANEL GVGVHVTSGP
AIDHKGMLAS LLTALGEGDV LFIDEIHRLN PVVEENLYPA MEDFKFDLFI GDGPHAKAVT
MNLPRFTLLG ATTRMGLLSS PLLDRFGFHW QLGYYDLSEM AAIVARSAQV LGVGMEDGGA
LEIARRSRGT PRIANRLLRR VRDFATVESS GVIGGKLAAA ALDRLSVDHA GLDALDRAYL
TVVVERFDGG PVGVDAIAAS MSEERGTLED VVEPFLLQAG FITRTPRGRM ATAAAFRHLG
VRAPGRVPTG GPLRSV
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