Gene Hoch_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3868 
Symbol 
ID8546263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5322081 
End bp5323406 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content69% 
IMG OID646388539 
ProductPeptidase M75, Imelysin 
Protein accessionYP_003268260 
Protein GI262197051 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3487] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.670817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.169885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC GCACCGACGT CGCCTGGTCG CGCCCGCGCG GCGCCCGCGC TCGCCGCCTT 
CTGGCCCTGC CCCTCACCTT CGCCCTGCTG CCGCTCGGCC TCGCCGCGTG CGGCGATGAC
GGCGGCGACA CCACGCCCGA CATCGACGCT GGCGCCGACG TCGACGCCGC GCCGCCGGTG
GCCCAGGTGA GCCGCGCCGA GGTCGTCGAG CACTACGCGA CCATCGTGCA CGCCAACTAC
AAGGACGCGC TCGACCGCGC CCTGCACCTG CAGAGCACCA TCGACCTGTT CCTGGCCGAG
CCCACGGCTT CGCGTTTCGA GACGGTCAAG CGCGCCTGGC TCGAGGCCCG CGTGCCCTAC
GGTCAGTCCG AGGCCTATCG CTTCTACGAG GGCCCGATCG ACGACGCCGA CGGCCCCGAG
GGTCAGCTCA ACGCCTGGCC CATGGACGAG GCCTACGTCG ACTACGTGAT CGATCCGCAG
ACCGAAGAGA CGATCATCAC CGGCATCGTC AACGACCCCG AGCGCGAGAT CACCAAGGAA
GCGCTGGCCT CGCTCAACGA GGGTGGCGAG GGCGACATCT TCGACGGCGG CGACAACTTC
GACCCCGAGA AGGCGGTGTC CACCGGCTAC CACGCCATCG AGTTCCTGCT CTGGGGTCAG
GACCTCAACG ACGAGGCCCC GGGCGAGCGT CCCTTCCAGG ACTACCTGGC CAGCGACGAT
CCCGACGCCA CCGCGCCCAA CGGCGAGCGC CGCGGCGAGT ACCTCAAGGT CGTCACCGAG
CTGCTGATCG ACGACCTCAG CGGCCTGGTC GACGCCTGGG CCCCGGACAC CGCCGACAAC
TACCGCGCCT CGTTCACCGG CGGCGACCCC GACGACGCCC TGCGCGACGT GCTCTCGGGC
ATCGGCGTGC TCAGCAAGGG CGAGCTGGGG GCCGAGCGCA TGGACGTGGC CCTGCGCAGC
CTCGACCAGG AAGACGAGCA CTCGTGCTTC TCGGACAACA CCCACGTGGA CATCGCCATG
AACGCCCAGG GCATCCAGAA CGTGTACCTG GGCCGCTACA GCTACCTCTC GGGCCCGAGC
ATCTCCGACC TGGTGCGCCA GGAGGATCCC GCGCTCGACG CCGAGATGCG CGCCGCCTTC
GAGAAGAGCC TGGCCGCGGT GCAGGCCATC CCCGTGCCCT TCGACCAGAA CATCGACGCC
CAGGGCTCCG AGGGCTGGAA TCTGGTCAAC GAGGCGGTCA ACGCGCTCTT TGACCAGAGT
GAGACGATCA TCGAGGTCGG CGAGGCGCTC GGCCTGGGCA ACGTCAGCGT CGACCTGCCC
GAGTAA
 
Protein sequence
MNIRTDVAWS RPRGARARRL LALPLTFALL PLGLAACGDD GGDTTPDIDA GADVDAAPPV 
AQVSRAEVVE HYATIVHANY KDALDRALHL QSTIDLFLAE PTASRFETVK RAWLEARVPY
GQSEAYRFYE GPIDDADGPE GQLNAWPMDE AYVDYVIDPQ TEETIITGIV NDPEREITKE
ALASLNEGGE GDIFDGGDNF DPEKAVSTGY HAIEFLLWGQ DLNDEAPGER PFQDYLASDD
PDATAPNGER RGEYLKVVTE LLIDDLSGLV DAWAPDTADN YRASFTGGDP DDALRDVLSG
IGVLSKGELG AERMDVALRS LDQEDEHSCF SDNTHVDIAM NAQGIQNVYL GRYSYLSGPS
ISDLVRQEDP ALDAEMRAAF EKSLAAVQAI PVPFDQNIDA QGSEGWNLVN EAVNALFDQS
ETIIEVGEAL GLGNVSVDLP E