Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3828 |
Symbol | |
ID | 8546221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5276388 |
End bp | 5277053 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646388498 |
Product | hypothetical protein |
Protein accession | YP_003268221 |
Protein GI | 262197012 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00159806 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0338696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCTCACTTTT TCGATATCTA TCTGTGGCAG CGAGTGTTGC CACAGTGCTC CTTCATGGAA AAATAGCATT CGCTGACCTT GAGCATTCGA CAGTAACTGT TGGATTGCGA GGTGGACCCG TATTGTCCAC GCTGGTAAGA AGCTCGTCTA CAGTGGAAGA AACACCTCGA CTTTACACAG GCCGCTTGCA TGCTGGCGCT GCCGGTCGCT TTTCGTTCGA AAAAGGCCGT AAGTGGGGGG TAGGACTCCG TTCCGAAGCA CTCTGGGTCC AACGAGGATT CGAGTCTTCC AGGGCAGCAG TTTTTGATCT CGACTATCTC GATACAAATC TGTCTGGAGA GTTACGATAT TTTTTCAACG ATACCATCAA TGGTTATCTA TCAGCCGGCC CCCGTATTGG CCTACTAATC CAGGCGCACC GTATCGATGC AAACGGTAAT ATCCAAAAAC AAGATCAGCT TGATTTTTTC GACCTCGGTT TCACTCTGGG GATGGGCGTA AGGTTAGATA TCGGCAACGA CCTAGCATTT GTGCTTCAAG GGAGTTTTGA ACAGAGCTTG ACGAATATCG ATGATAAGCT GGAGACACCA GGACTACATA ACCGTAGCTT TCTATGTACT ATTGGTGTGG ACTTGACAGT ATGGCGCTCC GAATGA
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Protein sequence | MKKISLFRYL SVAASVATVL LHGKIAFADL EHSTVTVGLR GGPVLSTLVR SSSTVEETPR LYTGRLHAGA AGRFSFEKGR KWGVGLRSEA LWVQRGFESS RAAVFDLDYL DTNLSGELRY FFNDTINGYL SAGPRIGLLI QAHRIDANGN IQKQDQLDFF DLGFTLGMGV RLDIGNDLAF VLQGSFEQSL TNIDDKLETP GLHNRSFLCT IGVDLTVWRS E
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