| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3767 |
|---|
| Symbol | |
|---|
| ID | 8546160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5178765 |
|---|
| End bp | 5179907 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646388437 |
|---|
| Product | signal peptidase I |
|---|
| Protein accession | YP_003268160 |
|---|
| Protein GI | 262196951 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0219598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.176079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTT CTGCAGCAGA CGCGCGCATC GAGCGCAAGC TTCACACCGA GGTCAAGAAG
CTGGTGCGCG AGACCCGCGC CAGTCTCGGC CGGCACGGCT CGCGACTCAG CAACCGGGTG
CGCGAGGATA TCGAGGGCCG GGTCGAGCGA CTCGAGACCG CGATGCGCGA GAAGGACGGC
ACCACCATGC GCGTGGAGCT GCCGGTTCTC GACGCCATGG TCGACGAACA GCTCGCGTTT
GCGCGCAAGT CGGCATTTCG TGAGTACGCC GAGTCGATCG GCATCGCCGT GATCATCGCC
GTGCTGCTGC GCACCTTCGT GATCGAGGCG TTTAAGATCC CGTCGGGCTC GATGATCCCG
ACCATGGAGA TCGGCGATCA CATCTTCGTC AACAAGTTCC TCTACGGCAT CCGCATCCCG
GTGCTGGGCG TGAAGTTCTT CCAGTTCCGC AAGCCCGAGC GCGGCGAGGT CATCGTCTTC
GAGAAGCCGC GCGACCGCGA GCGCCGCGAC TTCATCAAGC GTATCGTGGC CGTGGCCGGC
GACACCCTGG AGGTGCGCTG CGGCATGCTG TACGTCAACG GTGAGCGCGT GAGCCGCGAG
CTGGTGGCGG CCAGCGATTT CCACTGGGAT GACCCGCCCG AGCCCGGCAC CGGCGACACC
TGGACGCGGG TGGAGAGCAG CCGCTACCGC GAGACCCTGG GCGAGACCCG CTACGACACG
CTCTACGATC CCGACCGGCC CGAGTACGAG CACCTGGTCG ACGCCGGCGG GGCCGCGGGC
TGGGGCGCGT CCTCGAGCCT GACCAGCCGC GACTTCCCCA TGCAGAGCAG CGCGATCTTC
CCCGACTTCA ACCGCATCCC GCGCTGCGCC GACCACAGCG AGGAGAGCAG CTCGATCGGC
TGCTACGCGC CCTCGCCGCA GACGCAGAAG GGCGACGCCG GGGCGTGCGC GCTGCAGCGG
CACTACGTGG TGCCCGAGGG CCACGTCTTC GGCATGGGCG ACAACCGCGA GAACTCCAGC
GACTCGCGGC AGTGGGGTCC GGTGCCGCTC GACAATATCA AAGGCAAAGC GCTGTTCATC
TGGTGGTCGT CGAACGACAA GGTAGGTGTG CAGTGGGATC GTATCGGTAA GGTCGTAGAA
TGA
|
|---|
| Protein sequence | MATSAADARI ERKLHTEVKK LVRETRASLG RHGSRLSNRV REDIEGRVER LETAMREKDG
TTMRVELPVL DAMVDEQLAF ARKSAFREYA ESIGIAVIIA VLLRTFVIEA FKIPSGSMIP
TMEIGDHIFV NKFLYGIRIP VLGVKFFQFR KPERGEVIVF EKPRDRERRD FIKRIVAVAG
DTLEVRCGML YVNGERVSRE LVAASDFHWD DPPEPGTGDT WTRVESSRYR ETLGETRYDT
LYDPDRPEYE HLVDAGGAAG WGASSSLTSR DFPMQSSAIF PDFNRIPRCA DHSEESSSIG
CYAPSPQTQK GDAGACALQR HYVVPEGHVF GMGDNRENSS DSRQWGPVPL DNIKGKALFI
WWSSNDKVGV QWDRIGKVVE
|
|---|
| |