Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3665 |
Symbol | |
ID | 8546055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5044066 |
End bp | 5044803 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 646388333 |
Product | Rhs element Vgr protein |
Protein accession | YP_003268059 |
Protein GI | 262196850 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.412379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000248141 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCGCG CTGGCAGGCC CGGATCCTCG ACGGGCGATA TGGGTCTCAG CGGCGTGTAC TTCGCCGTCG TCACCCAGAA CAAAGACGAG GAGCAGAAGA TCGGGCGCGT CAAGGTCAAG CTGCCCTGGC TCTCGGGCAG CGGCCAGGAC GAGTCGGCGT GGGCGCAGCT CGCCACCCCC ATGGCGGGCG CCGAGTTCGG CGCGTTCACG CTGCCCGAGC CCGACGACGT GGTCGCCGTG ATGTTCCTCG GCGGCAACAT CAACTTTCCG ATCATCATCG GTGGGGTGTG GAGCTCGACC GATACGCCGC CGGAGACCAA CGAGAACGGC AAGAACGACT TCCGCTTCAT CAAGTCGCGC AGCGGTCATC GCCTGCTGCT CGACGACTCC GACAGCACCA AGGTCGTGCT CACCGACAAC GGCAACAAGA ACTACGCCGG CGTCGGCAAC TTCGCCGAAG GCGGCGACTC GCCCAACAAG ATGAAGCTCG AGACGCCCTC GGCCATCAAC GGCAGCCCAG AGAAGGGCGT GGCGGTGAAT TCGTCCCAGG GGACGATCAA CATCTGGTGC CCCAACGGCA CGCTCAAGGT CGAGGGCCAG CACGTCGAGA TCACGGCCAC GCAAAAGGCC AACGTGAAGG CCGGCGGCGA GTTCAAGGCC GAGGGCAGCA CCAAAGCTGA GTCGACCTCG GTCGGCCCGG GCAAGTACGA GGGCAGCTCG CTCAGCGTCG GCCCGTGA
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Protein sequence | MSRAGRPGSS TGDMGLSGVY FAVVTQNKDE EQKIGRVKVK LPWLSGSGQD ESAWAQLATP MAGAEFGAFT LPEPDDVVAV MFLGGNINFP IIIGGVWSST DTPPETNENG KNDFRFIKSR SGHRLLLDDS DSTKVVLTDN GNKNYAGVGN FAEGGDSPNK MKLETPSAIN GSPEKGVAVN SSQGTINIWC PNGTLKVEGQ HVEITATQKA NVKAGGEFKA EGSTKAESTS VGPGKYEGSS LSVGP
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