| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3657 |
|---|
| Symbol | |
|---|
| ID | 8546047 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5033073 |
|---|
| End bp | 5033978 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646388326 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003268052 |
|---|
| Protein GI | 262196843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02241] conserved hypothetical phage tail region protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.111634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00478101 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC GTTCATATGC CGCTGGTAGG TTCGCGTTCA GCATCGACGG CGCGTTTGCT
GCCTACATCA AGAAAGTCCA GGGTGGTATC ACCAAGGGTG AGCTCGCCAC GCACAACCTG
GGTACCACCA ACATCCAGAA GAAGCACCTG GCCACCATCA CCCACGAGAC CGCGACGCTG
AGCATCGGTC TGGGTATGGG CAAGCCGCTG TGGGACTGGA TCAAGGCGTC CTTCGACAAG
GACTTCCAGG TCAAGACCTG CGCGCTCACG GCCGCCGACT TCAACTACAA GGCCATGGCC
ACCCGCGTCT TCCAGGACGC GTACATCAAG AAGGTGACCC TGCCGGCCTT CGAGGGTTCC
AACAAGGAGC CCGTGTACCT CGACGTCGAG ATCGACCCCG AGATCATCCG CTACGAGCCC
GCTGGTGGCG AGGACATCAA GGGCGACGAG AACCCGAACA CCAAGAAGGC GCTGTGCTCG
AACTTCCGCT TCGAAGTGAG CGGTCTCGAG GAGTCCTGCA AGCGCATCTC CAAGGTCGAC
TCGCTCGCCT GGGAGCAGAA GGTGGTCAAG GACGAGGTCG GCGCCTTCCG CGAGCCGACC
AAGCACGCCG CCGCGCTCAC CGTGCCGAAC ATCAAGCTCA GCATCTCGAT GGCCGACATC
GGTCCCTGGG CCGACTGGCA CAAGAGCTTC GTCATCGACG GTAAGTGCAC CGACAGCGAC
GAGAAGACGG CATCGCTCGT CCTCCTCGGT CCCGACCTCA ACGAGGAGCT GGTGCGCATC
AACTTCAACC ACGTCGGCAT CATCTCGCTG GAGCAGGACG GCCTCGAGGC CAACTCCGAG
AACGTCGCGC GCTTCTCGGT CGAGCTCTAC GCCGAGGAGA TGGTGATCGA CAGCTACGCG
ACCTGA
|
|---|
| Protein sequence | MSARSYAAGR FAFSIDGAFA AYIKKVQGGI TKGELATHNL GTTNIQKKHL ATITHETATL
SIGLGMGKPL WDWIKASFDK DFQVKTCALT AADFNYKAMA TRVFQDAYIK KVTLPAFEGS
NKEPVYLDVE IDPEIIRYEP AGGEDIKGDE NPNTKKALCS NFRFEVSGLE ESCKRISKVD
SLAWEQKVVK DEVGAFREPT KHAAALTVPN IKLSISMADI GPWADWHKSF VIDGKCTDSD
EKTASLVLLG PDLNEELVRI NFNHVGIISL EQDGLEANSE NVARFSVELY AEEMVIDSYA
T
|
|---|
| |