Gene Hoch_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3633 
Symbol 
ID8546023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4996781 
End bp4998895 
Gene Length2115 bp 
Protein Length704 aa 
Translation table11 
GC content69% 
IMG OID646388302 
ProductNAD+ synthetase 
Protein accessionYP_003268028 
Protein GI262196819 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.400497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00213692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCACT TTCATTCGAT CTACCGCCAC GGATTCGTGC GCGCCGCGGT CGCGGTTCCC 
GAAGTGCGCG TCGCCGATCC GGCCTTCAAC GCCGCGCGCA CCTGCGAGCT GGCGCGGCGC
GCCTCGCAAC AGCACGCGGC CGTGCTGCTG TTTCCCGAGC TGGGCCTGAG CGCGTACTCC
AATGAAGATC TGTTCCATCA AGATGCACTG CTCGACGGCG TGCTCGCGGC CCTGCAGACC
GTGCTCGAGG CCAGCGAGAC GCTGTCGCCG CTGCTGCTGC TGGGCGCGCC TCTGCGCTTC
CGCGGAGCGC TGTTCAACTG CTGTGTAGCC GTCTACCACG GACGTATCCT GGGCGTCACA
CCCAAGTCGT ATCTGCCCAA CTATCGCGAG TTCTACGAGA AGCGCCAGTT CACGGCAGCG
CGCTGCGCGC TGCTCGAGGA GGTCACGCTG CTGGGGCAGA CCGTGCCCTT TGGCAACGAC
ATCGTGTACG AGGCCGACAG CCTGCCGGGC TTCGCGGTCC ACGCCGAGAT CTGCGAGGAC
GTGTGGACGC CGATTCCGCC GAGCACCTAC GCGGCCCTGG CCGGGGCCAC GGTGCTGGCC
AATCTCTCGG CCTCGAACAT CACCATCGGC AAGGCCGACT ACCGCCGCGA TCTGTGCGCC
GCGCACTCGG GCCGCTGCGT GGCCGCGTAC CTGTACTCGG CCGCGGGGCC GGGCGAGTCC
ACCACCGACC TGGCCTGGGA CGGCCAGGCG CTGATCTACG AGAACGACCT GCTGCTGGCC
GAGGCCGAGC GCTTCCATCC CAGCGAGCAG CTCATCTTCG CCGACGTCGA TATCGAGCGC
CTGCTGCAGG AGCGCATGCG CCTCACCAGC TTTCAGGACA CCATCGCCGA CCACGGCGAG
CGCGTGCGCG CCGTGCGCCG GGTGCGCTTT GCCTTCCAGG TGCCGCAGGA CGCCCAACCC
GAGGATCGGG CGCCGACGCT GCGGCGCGCG CTCGACCGCT TCCCCTTCGT GCCCAGCGAC
GACGCCGCCC GCGACGAGCG CTGCTACGAG GCCTACAACA TCCAGGTGCA CGGGCTCCTG
CAGCGATTGG CCAGCACCGG CATCGACAAG CTCGTCATCG GCGTCTCCGG CGGCCTCGAC
TCGACCCACG CGCTGATCGT CGCGGCCAAG ACCATGGACC GCCTGGACCT GCCGCGCGAG
AACATCCTCG CCTATACCAT GCCGGGATTC GCCACCAGCG AGCGCACCCT GCGCAACGCC
CACGCGCTGA TGAGCGCGCT GGGCGCAACC GCGCGCGAGA TCGACATCCG CCCCTCGTGC
CGGCAGATGC TCGCGGACCT CGACCACCCC TTCGCGCGCG GCGAGGAGGT CTACGACGTG
ACCTTCGAGA ACGTCCAGGC CGGCGAGCGG AGCTCCCATC TCTTCCGCCT GGCCAACCAC
AACGGCGGCC TGGTGCTCGG CACCGGCGAC CTCAGCGAGC TGGCGCTGGG CTGGTGCACC
TACGGCGTCG GCGACCAGAT GTCCCATTAC AACGTCAACG CCTCGGTGCC CAAGACCCTC
ATCCAGCACC TCGTCCGCTG GGTCGCCGAC AACGGCGTGC TCAACCCGGC CGCCTCGGAG
GTGCTGCGCG ACATCCTGGC CACCGAGATA TCGCCCGAGC TGGTGCCGGC GAGCAGCGCT
GCCGACGAGG ACGGCAGCGG CGACGGCCAG GGCGGGGACG CTCGCCAGAG CGCGCCCGCA
CAGCGCACCG AGGACATCAT CGGCCCCTAC GAGCTGCAGG ACTTCCACAT CTACTACCTC
ACCCGCTACG GCTTTCGCCC CAGCAAAGTG GCCTTCCTGG CCCACTGCGC CTGGGGCGAG
CTGGAGCGCG GCGACTGGCC CGGCGGCTTC GCCGAGGAAG ACCGCCGCGC CTACGAGCGC
GCGACCATCA AGAAGTGGCT GCGGGTGCTG CTGCATCGCT TCTTCCAGGT CAGCCAGTTC
AAGCGCTCGG CCATGCCCAA CGGCCCCAAA GTGGGCTCGG GCGGCTCGCT ATCGCCGCGC
GGCGACTGGC GCGCGCCCAG CGATTCGCGG GCGGCGGTGT GGTTGGACGA ACTCGATCAC
AACGTGCCGG ACTGA
 
Protein sequence
MSHFHSIYRH GFVRAAVAVP EVRVADPAFN AARTCELARR ASQQHAAVLL FPELGLSAYS 
NEDLFHQDAL LDGVLAALQT VLEASETLSP LLLLGAPLRF RGALFNCCVA VYHGRILGVT
PKSYLPNYRE FYEKRQFTAA RCALLEEVTL LGQTVPFGND IVYEADSLPG FAVHAEICED
VWTPIPPSTY AALAGATVLA NLSASNITIG KADYRRDLCA AHSGRCVAAY LYSAAGPGES
TTDLAWDGQA LIYENDLLLA EAERFHPSEQ LIFADVDIER LLQERMRLTS FQDTIADHGE
RVRAVRRVRF AFQVPQDAQP EDRAPTLRRA LDRFPFVPSD DAARDERCYE AYNIQVHGLL
QRLASTGIDK LVIGVSGGLD STHALIVAAK TMDRLDLPRE NILAYTMPGF ATSERTLRNA
HALMSALGAT AREIDIRPSC RQMLADLDHP FARGEEVYDV TFENVQAGER SSHLFRLANH
NGGLVLGTGD LSELALGWCT YGVGDQMSHY NVNASVPKTL IQHLVRWVAD NGVLNPAASE
VLRDILATEI SPELVPASSA ADEDGSGDGQ GGDARQSAPA QRTEDIIGPY ELQDFHIYYL
TRYGFRPSKV AFLAHCAWGE LERGDWPGGF AEEDRRAYER ATIKKWLRVL LHRFFQVSQF
KRSAMPNGPK VGSGGSLSPR GDWRAPSDSR AAVWLDELDH NVPD