Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3628 |
Symbol | |
ID | 8546018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4987657 |
End bp | 4988355 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646388297 |
Product | HAD-superfamily subfamily IB hydrolase, TIGR01490 |
Protein accession | YP_003268023 |
Protein GI | 262196814 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like [TIGR01490] HAD-superfamily subfamily IB hydrolase, TIGR01490 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.856585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00143877 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCGCCT CGATCTCGAT GTCACGCGTA AAGTTTAAGA ATTCCGCAGC CTTCTACGAT GTTGATGGCA CCCTCATCCG CCTCAACATC GTTCATACCT ATGCGTTCTA CGCGGCCCGT GAGCCCGCGC TGGCCAAGGC CGCGCGCTCC TGGGGCATGA CGGCGGCCAG TCTGCCGCTG TTCTGGGCCG CGGACAAGAT CTCGCGCAAG TGGTTCAACG AGCTGTTCTA CCGCATGTAC GAGGGTATGA GCGAAGACCG CCTGGTCACC CTGTCCGAAG AGCTCTTCGA AGAGGTGATG AAGCCCAACA TCTTTCCGCG TGCGCCCGAC CTCATCGCCG AGTCGCGGCG CGCCGGCTGC CGGCAGGTGA TCATCACCGG CGCGCTCGAC TTCTCCATCC GGCCGCTGGC CGAGTATCTG GGCGTCGACG ACTTCATCGC CAACCGCCTC GAGTTTCACG AGGGCTACGC CACCGGCAAG CTCGAGAAAC CCTTTGTCGG CGGCGCGACC AAGGCCGACA TCATGCGCGC CTACGCCCGC GCTCACGACG TCGACCTCAC CGAGTCGTGG GCGTATTCGG ACAGCTATTC GGATTTTCCG ATGCTGGCCG TGGTCGGTAG GCCGACCGCG GTCAACCCCG ACTTTCGCCT CAACGCCGTG GCGCGCTCCT ACGACTGGCC GGTGCTGGAC CTGCGCTGA
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Protein sequence | MGASISMSRV KFKNSAAFYD VDGTLIRLNI VHTYAFYAAR EPALAKAARS WGMTAASLPL FWAADKISRK WFNELFYRMY EGMSEDRLVT LSEELFEEVM KPNIFPRAPD LIAESRRAGC RQVIITGALD FSIRPLAEYL GVDDFIANRL EFHEGYATGK LEKPFVGGAT KADIMRAYAR AHDVDLTESW AYSDSYSDFP MLAVVGRPTA VNPDFRLNAV ARSYDWPVLD LR
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