Gene Hoch_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3603 
Symbol 
ID8545993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4958520 
End bp4959329 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID646388272 
ProductMethyltransferase type 11 
Protein accessionYP_003267998 
Protein GI262196789 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000473766 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATCCCG CCTTTGCCGG CTTGACCCTG TGCCCGAGCT GCGGCGCCGA CGAGATGCGC 
GGCCAGGGCC GCAGCCTGCG CTGCCAGCGC TGCTCCGACG AGATCGCCAG CGACGCGCAC
TTCCTCGACT TTGGCGGCCA CACGCCGCGC GGCGCCTTCT CCGGCATCAC CACGCAGCAG
GCGCTGATGG AGAGCGAGCT GGTGGCCCGC ATCTACGAGC GCGTGTGGCG GCCGGCCTTC
GTGCGCCTGA TCGCGGGCAA GGGCGCGGGC GCGCGCACCG GCGGCTTCGC CGGCGAGCTG
TTCATCCACA AGCACAGCCT GGCGATGGAG GACCGCGAGG GCCCGTGGCT CGACGTCTCG
TGCGCCAGCG GCCTGTTCAC GCGCGCGATG GCGGCCGCCA ACCCCGGCGA TCTCGTGGTC
GGCCTCGACA TCTCGGCGGC CATGCTGGAG ATGGCGGCGC GGCGCGCCAA GGGCTACGGC
AATGTGGTCT TGGTGCGCGC GGACGCGCAC CATCTGCCGT TTCGAGAGGG CGCGTTTGGC
GGCGTCAACA ACAGCGGCGC GCTGCACGTC TACGACGATC CCGAGCAGGT GTTTCGCGAG
ATCTTGCGGG TGCTGCGCCC GGGCGGCGTG TACGTCGGCA GCACCTTCTC GCGCGCGACT
TCATGGACCT CGCGCACCCT GGCGCGGGTG GCCAAGATCC GCCGCTACGA GCCGCTGGAC
CTGCGCGCCT GGCTGTCGCG CGTCGGCTTC GTCGACTACG AGGAGATTCT CCTCGGCGGC
TCGTTCATCT TCCGCGTGCG CAAGCCCTAG
 
Protein sequence
MDPAFAGLTL CPSCGADEMR GQGRSLRCQR CSDEIASDAH FLDFGGHTPR GAFSGITTQQ 
ALMESELVAR IYERVWRPAF VRLIAGKGAG ARTGGFAGEL FIHKHSLAME DREGPWLDVS
CASGLFTRAM AAANPGDLVV GLDISAAMLE MAARRAKGYG NVVLVRADAH HLPFREGAFG
GVNNSGALHV YDDPEQVFRE ILRVLRPGGV YVGSTFSRAT SWTSRTLARV AKIRRYEPLD
LRAWLSRVGF VDYEEILLGG SFIFRVRKP