Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3571 |
Symbol | |
ID | 8545961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4919340 |
End bp | 4921478 |
Gene Length | 2139 bp |
Protein Length | 712 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646388240 |
Product | Glutaryl-7-aminocephalosporanic-acid acylase |
Protein accession | YP_003267966 |
Protein GI | 262196757 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.111745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0870635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGTG TCCTTTTCGG GTTGCTGGTC GTCTGCGGGG CGGCGCTCGC GGCCGCCGGG GTCTGGCTCG CCGTTCGTCC GCCAGCGGTT CCGCCGGAGT TAGCTGAGCG TGGCGCAGCT TACGATGTTG AGATCCTGCG TGACACCTGG GGCGTGCCCC ATATTTTCGG CAAGCGCGAC ACCGACGTCG CCTACGGTCT GGCCTATGCC CACGCCGAGG ACGACTTCGC CACCATCCAG GGTACGCTGC TCGCCGCCCG CGGGGAGCTG GCCCGGGTCC ACGGCGAGCA TGCTGCGCCC AACGACTACA TGGTCCATCT CCTGCGTATA CGCGACGTGG TCGCCGCCGG TTACCCCGAG CTCGACGCCG CCACCCGCGC GCTGTGCGAC GCGTACGCCG ACGGCATCAA CCACTACGCC GCGCTGCACC CCGAGCAGGC GGTGCGCGAC TTCTACCCGG TGCGCGGCGA CGACGTGGTC GCCGGCTTCG TGCACAAGGT CCCGCTGTTC TACAAGCTCG ACCGCGTGCT GGGCGAGCTG TTCTCGGACG AAGGACCGGA AAAGAGCGGC GGCGAGCACA CCCGGCGGGA CGCGGCCGAG GAGCCCGCGC CCATGGGCTC GAACGCCTTC GCCGTGGCGC CGAGCCGCAG CGCCGACGGC AGCACCCGGC TGGTCGTCGA TCCCCACCAG CCGTGGACCG GCCCGGTGGC CTGGTACGAG GCCCACGTCC GCAGCGAAGA GGGCTGGGAC GCGGTCGGCG CGCTGTTTCC CGGCGCCCCC GTGCTCCTGG TCGGCCACAA CCGCGACCTC GGCTGGTCGC ACACCGTCAA CGAGCCCGAC CTCATCGACG TCTTCGAGCT GGTGATGGAT CCCGAGGACG ACAAGCGCTA CCGCTTCGGC GACGAGTGGC GCACGCTCGA GCAGCGCGTG GCCCCGATCG AGGTGTCGCT GTGGGGGCCG CTTAGCTGGA CCTTCGAGCG CGAGGTGTTG TGGTCCGAGC ACGGCCCCGT GGTCCAGCGC CCGCACGGCA CCTACGCCAT CCGCCTGGCC AGCTACGGCG AGGTCGGCGC CATCGAGCAG TGGTACGGCA TGAACAAGGC GACCACGCTC GAGAGCTGGA AGCAGGCCAT GCGCGCGCTG GCGGTGCCGA TGTTCAACAC CATCTACGCC GACCGCGAGG GCAACATCCT CTATGTATAC AACGCCCGCC TGCCGCTGCG CGCGGAGGGC TACGAGTGGG CCGGGTTGCT GCCCGGCGAG CGCGCCGAGG TGGTGTGGGA CGAGTTTTTG CCCTTCGACC GCCTGCCCAT GGTCGAGAAT CCGGCCGCGG GCTTCGTGCA GAACTGCAAC AGCACGCCCT TCGAGACCAC CAGCGGCGCC GACAACCCGG CCCGCGACGC CTATCCCGCG TCCTTTGGCA TCGAGCTGTT CCAGACCAAC CGGGCCATGC GCGCGCGCGC GCTGCTCGAG CAGGACCAGG ACATCACCGC CGACGAGCTT CTGGCCATCA AGTTCGACAC CCGCTACGCC AGCGACTCGC GCCTGGCCGG CTTCATCGCC CAGATCGCGG CCGCGCCGGC GCCCAGCGAG CCCGCGCTGG CCGAGGCCGT GACCATGCTC GGCGCCTGGG ATCTCGACGC CAGCGGCGAC AGCGAGGCCG CCGCGCTGGC CATCCTGGCC TTTGCCAAGC CCATGCGCCA GCACCGCGAC ACCATCCCCA CCGAGGAGCT GATGGCGTCC CTGGCCGAGG CCGTCGAGGT GCTCGAGACC CATCACGGCA GCATCCACGT GCCGCTGGCC GAGCTGCAGC GGCTGCGCCG CGGCGAGGTC GAGGTCGGGC TCGACGGCGG CCCCGACACG CTGCGCGCGA TCCACGCCGA CCTCGAAGAC GGGCATCTCA TCGGCCACGC CGGCGACTCG CACGTGATGC TGGTCGAGTG GGACGCCGAG GGCCGGGTGC GCTCGCGCAG CCTGCAGCCC TACGGCAACG CCAAGCGCGA CCCGCAGTCG CCGCACTACG CCGATCAGGC GGCCCTGTTC GCGGCCCACG CGCTCAAGCC GGTGTGGTAC GAGGAGGCCG ACATCCGGCG CAACCTCGAG CGCGCCTACG TACCCGGCGA AGAAGAGCGG GCCGAGTAA
|
Protein sequence | MKRVLFGLLV VCGAALAAAG VWLAVRPPAV PPELAERGAA YDVEILRDTW GVPHIFGKRD TDVAYGLAYA HAEDDFATIQ GTLLAARGEL ARVHGEHAAP NDYMVHLLRI RDVVAAGYPE LDAATRALCD AYADGINHYA ALHPEQAVRD FYPVRGDDVV AGFVHKVPLF YKLDRVLGEL FSDEGPEKSG GEHTRRDAAE EPAPMGSNAF AVAPSRSADG STRLVVDPHQ PWTGPVAWYE AHVRSEEGWD AVGALFPGAP VLLVGHNRDL GWSHTVNEPD LIDVFELVMD PEDDKRYRFG DEWRTLEQRV APIEVSLWGP LSWTFEREVL WSEHGPVVQR PHGTYAIRLA SYGEVGAIEQ WYGMNKATTL ESWKQAMRAL AVPMFNTIYA DREGNILYVY NARLPLRAEG YEWAGLLPGE RAEVVWDEFL PFDRLPMVEN PAAGFVQNCN STPFETTSGA DNPARDAYPA SFGIELFQTN RAMRARALLE QDQDITADEL LAIKFDTRYA SDSRLAGFIA QIAAAPAPSE PALAEAVTML GAWDLDASGD SEAAALAILA FAKPMRQHRD TIPTEELMAS LAEAVEVLET HHGSIHVPLA ELQRLRRGEV EVGLDGGPDT LRAIHADLED GHLIGHAGDS HVMLVEWDAE GRVRSRSLQP YGNAKRDPQS PHYADQAALF AAHALKPVWY EEADIRRNLE RAYVPGEEER AE
|
| |