Gene Hoch_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3571 
Symbol 
ID8545961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4919340 
End bp4921478 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content71% 
IMG OID646388240 
ProductGlutaryl-7-aminocephalosporanic-acid acylase 
Protein accessionYP_003267966 
Protein GI262196757 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0870635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTG TCCTTTTCGG GTTGCTGGTC GTCTGCGGGG CGGCGCTCGC GGCCGCCGGG 
GTCTGGCTCG CCGTTCGTCC GCCAGCGGTT CCGCCGGAGT TAGCTGAGCG TGGCGCAGCT
TACGATGTTG AGATCCTGCG TGACACCTGG GGCGTGCCCC ATATTTTCGG CAAGCGCGAC
ACCGACGTCG CCTACGGTCT GGCCTATGCC CACGCCGAGG ACGACTTCGC CACCATCCAG
GGTACGCTGC TCGCCGCCCG CGGGGAGCTG GCCCGGGTCC ACGGCGAGCA TGCTGCGCCC
AACGACTACA TGGTCCATCT CCTGCGTATA CGCGACGTGG TCGCCGCCGG TTACCCCGAG
CTCGACGCCG CCACCCGCGC GCTGTGCGAC GCGTACGCCG ACGGCATCAA CCACTACGCC
GCGCTGCACC CCGAGCAGGC GGTGCGCGAC TTCTACCCGG TGCGCGGCGA CGACGTGGTC
GCCGGCTTCG TGCACAAGGT CCCGCTGTTC TACAAGCTCG ACCGCGTGCT GGGCGAGCTG
TTCTCGGACG AAGGACCGGA AAAGAGCGGC GGCGAGCACA CCCGGCGGGA CGCGGCCGAG
GAGCCCGCGC CCATGGGCTC GAACGCCTTC GCCGTGGCGC CGAGCCGCAG CGCCGACGGC
AGCACCCGGC TGGTCGTCGA TCCCCACCAG CCGTGGACCG GCCCGGTGGC CTGGTACGAG
GCCCACGTCC GCAGCGAAGA GGGCTGGGAC GCGGTCGGCG CGCTGTTTCC CGGCGCCCCC
GTGCTCCTGG TCGGCCACAA CCGCGACCTC GGCTGGTCGC ACACCGTCAA CGAGCCCGAC
CTCATCGACG TCTTCGAGCT GGTGATGGAT CCCGAGGACG ACAAGCGCTA CCGCTTCGGC
GACGAGTGGC GCACGCTCGA GCAGCGCGTG GCCCCGATCG AGGTGTCGCT GTGGGGGCCG
CTTAGCTGGA CCTTCGAGCG CGAGGTGTTG TGGTCCGAGC ACGGCCCCGT GGTCCAGCGC
CCGCACGGCA CCTACGCCAT CCGCCTGGCC AGCTACGGCG AGGTCGGCGC CATCGAGCAG
TGGTACGGCA TGAACAAGGC GACCACGCTC GAGAGCTGGA AGCAGGCCAT GCGCGCGCTG
GCGGTGCCGA TGTTCAACAC CATCTACGCC GACCGCGAGG GCAACATCCT CTATGTATAC
AACGCCCGCC TGCCGCTGCG CGCGGAGGGC TACGAGTGGG CCGGGTTGCT GCCCGGCGAG
CGCGCCGAGG TGGTGTGGGA CGAGTTTTTG CCCTTCGACC GCCTGCCCAT GGTCGAGAAT
CCGGCCGCGG GCTTCGTGCA GAACTGCAAC AGCACGCCCT TCGAGACCAC CAGCGGCGCC
GACAACCCGG CCCGCGACGC CTATCCCGCG TCCTTTGGCA TCGAGCTGTT CCAGACCAAC
CGGGCCATGC GCGCGCGCGC GCTGCTCGAG CAGGACCAGG ACATCACCGC CGACGAGCTT
CTGGCCATCA AGTTCGACAC CCGCTACGCC AGCGACTCGC GCCTGGCCGG CTTCATCGCC
CAGATCGCGG CCGCGCCGGC GCCCAGCGAG CCCGCGCTGG CCGAGGCCGT GACCATGCTC
GGCGCCTGGG ATCTCGACGC CAGCGGCGAC AGCGAGGCCG CCGCGCTGGC CATCCTGGCC
TTTGCCAAGC CCATGCGCCA GCACCGCGAC ACCATCCCCA CCGAGGAGCT GATGGCGTCC
CTGGCCGAGG CCGTCGAGGT GCTCGAGACC CATCACGGCA GCATCCACGT GCCGCTGGCC
GAGCTGCAGC GGCTGCGCCG CGGCGAGGTC GAGGTCGGGC TCGACGGCGG CCCCGACACG
CTGCGCGCGA TCCACGCCGA CCTCGAAGAC GGGCATCTCA TCGGCCACGC CGGCGACTCG
CACGTGATGC TGGTCGAGTG GGACGCCGAG GGCCGGGTGC GCTCGCGCAG CCTGCAGCCC
TACGGCAACG CCAAGCGCGA CCCGCAGTCG CCGCACTACG CCGATCAGGC GGCCCTGTTC
GCGGCCCACG CGCTCAAGCC GGTGTGGTAC GAGGAGGCCG ACATCCGGCG CAACCTCGAG
CGCGCCTACG TACCCGGCGA AGAAGAGCGG GCCGAGTAA
 
Protein sequence
MKRVLFGLLV VCGAALAAAG VWLAVRPPAV PPELAERGAA YDVEILRDTW GVPHIFGKRD 
TDVAYGLAYA HAEDDFATIQ GTLLAARGEL ARVHGEHAAP NDYMVHLLRI RDVVAAGYPE
LDAATRALCD AYADGINHYA ALHPEQAVRD FYPVRGDDVV AGFVHKVPLF YKLDRVLGEL
FSDEGPEKSG GEHTRRDAAE EPAPMGSNAF AVAPSRSADG STRLVVDPHQ PWTGPVAWYE
AHVRSEEGWD AVGALFPGAP VLLVGHNRDL GWSHTVNEPD LIDVFELVMD PEDDKRYRFG
DEWRTLEQRV APIEVSLWGP LSWTFEREVL WSEHGPVVQR PHGTYAIRLA SYGEVGAIEQ
WYGMNKATTL ESWKQAMRAL AVPMFNTIYA DREGNILYVY NARLPLRAEG YEWAGLLPGE
RAEVVWDEFL PFDRLPMVEN PAAGFVQNCN STPFETTSGA DNPARDAYPA SFGIELFQTN
RAMRARALLE QDQDITADEL LAIKFDTRYA SDSRLAGFIA QIAAAPAPSE PALAEAVTML
GAWDLDASGD SEAAALAILA FAKPMRQHRD TIPTEELMAS LAEAVEVLET HHGSIHVPLA
ELQRLRRGEV EVGLDGGPDT LRAIHADLED GHLIGHAGDS HVMLVEWDAE GRVRSRSLQP
YGNAKRDPQS PHYADQAALF AAHALKPVWY EEADIRRNLE RAYVPGEEER AE