Gene Hoch_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3513 
Symbol 
ID8545902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4842881 
End bp4844398 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content68% 
IMG OID646388181 
Productprotein of unknown function DUF362 
Protein accessionYP_003267908 
Protein GI262196699 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.606355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.745279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTC CCACCGAGCC CAAGGTCATC CTGCGCGACT GTCGCACCTA CGACGTCGCC 
CGCATCCGCG AGATCGTGGC CGACGGGATG CGGACCTTGG GGGTCGTGCC CTCCGGTCGT
ACCCTGGTGA AGCCCAATCT CGTGGCCGCG GGCGAGATGT TTCCGCACGC GCACACCCGG
GCCGAGTTCG GCGAGGGCGT GCTGCGCGCC ATCCGCGACC TCGCCGGCGA GGGCATGGAG
GAGCTGGCCG TGGGCGAGCG CTGCGGCATC ACCATCCCCA CGCGCATGTC GTTTCGCGAG
TCGGGCTGGG ACGACGCCCT CGCGCGCGTG GACGGGGTCA AGCGCTACTG CTTCGAAGAG
GTGCCCCAGG TCGAGATTCC GCTGCGCCAC CCGCAGCGCC TGCGCGACTA CGTGTTCACG
CCCGAGCCCG TGGCCCGCGC CGACTGCTTC ATCAACCTGC CCAAGTTCAA GGCTCACCCG
TGGACCACGG TGACCTTCTC GATGAAGAAC TACATCGGCA TCCAGGACGA CCGCCACCGG
CTGATCGACC ACGATCATCG GCTCAACGAG AAAGTCGCCG ACCTGCAGTT CATCATCCAG
CCGCAGTTCA TCGCCATCGA CGCCATCATC GCCGGCGAGG GGCGCATGCT CACGCCCACG
CCCTTCGAGC TCGGCATGAT CATCATGGGC AACAGCCAGG TCGCCATCGA CGCCGTGTGC
AGCGCCATCA TCGGGCTCGA GCCGCGCTCG GTGGAGCACA TTCGCCTGGC CGAGGACTAC
GGCTTCGGCA CCAGCGACAT CGCGCGCATC GACATCAGCG GCGACCTCAG CCTCGAGCAG
GCCAAGCAGC GGGCCCAGGG CTTCCGCGTC GGCCTCATCC GGGTCGAGAA GTACTTCGAG
GGCACCAACG TCACCGCCTA CGCCGGCCCG CCTCCCGAGC GCGAGCACTC CGACTACTGC
TGGGGCGGCT GCCCGGGCGC CATGCAGGAG GCCATCGAGA TCCTGCGCCA GTACGACGAG
CAATGCGACG CCAAGCTGCC GCACCTGCAC GTGGTCTTCG GCGCCTACGA GGGCCCCATC
GACTACAAGC CCGGCGAGAA GGTGGTGTTC ATCGGCGACT GCGCCACCTG GCAGGGGCGC
ATCGGCGACC AGCTCGTCGA TATTCGCAGC CTGTATCGCG ACCGCGACAC CCGCGACCCG
CACCAGGCCG AGCACGACGA CATCTACAAG AAGATGGCCA CGACCACGGC CAAGCTGGTG
CGCAACCGCG GCACCAACCA CATGCGCCTC GAGGGCTGCC CGGTGAGCGT GGCCGAGCAG
GTGCTGGCCC TGGTCGGCCT GTCCGATATC AAGAACCCGT ACATGGCGCC GGAGCAGATC
GTCAAGTTCA ACCGCGGCTA CCTGGGCTGG CGCGCGCGCT CCATGGTCAA CCGGCTGATG
GGCAAGCGCT ACCAGCGCCA CGGCGGCTTC GCCGAGCGCG GCGAGGCAGC GCCCGAGGTC
GGCGCGGCCT CGGGCTGA
 
Protein sequence
MRIPTEPKVI LRDCRTYDVA RIREIVADGM RTLGVVPSGR TLVKPNLVAA GEMFPHAHTR 
AEFGEGVLRA IRDLAGEGME ELAVGERCGI TIPTRMSFRE SGWDDALARV DGVKRYCFEE
VPQVEIPLRH PQRLRDYVFT PEPVARADCF INLPKFKAHP WTTVTFSMKN YIGIQDDRHR
LIDHDHRLNE KVADLQFIIQ PQFIAIDAII AGEGRMLTPT PFELGMIIMG NSQVAIDAVC
SAIIGLEPRS VEHIRLAEDY GFGTSDIARI DISGDLSLEQ AKQRAQGFRV GLIRVEKYFE
GTNVTAYAGP PPEREHSDYC WGGCPGAMQE AIEILRQYDE QCDAKLPHLH VVFGAYEGPI
DYKPGEKVVF IGDCATWQGR IGDQLVDIRS LYRDRDTRDP HQAEHDDIYK KMATTTAKLV
RNRGTNHMRL EGCPVSVAEQ VLALVGLSDI KNPYMAPEQI VKFNRGYLGW RARSMVNRLM
GKRYQRHGGF AERGEAAPEV GAASG