| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3511 |
|---|
| Symbol | |
|---|
| ID | 8545900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4839223 |
|---|
| End bp | 4842003 |
|---|
| Gene Length | 2781 bp |
|---|
| Protein Length | 926 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 646388179 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003267906 |
|---|
| Protein GI | 262196697 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.45252 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC CTCGGCTCTT GTCTCGACGG GCCGCGATTC TGGCCGCCGC CGGGATCGTC
CTCGTCCTCG GTGGCGTGCT CGGCTGGTTT CTGTGGCCCG AGCCGCCGGG CTCGCTGCCC
CTGAGCGACC CGACCGCGCC ACAAGACGAT CCGCGTAACC CGCTGCTCAC GCCCGGTCCG
CGGCCGGAGC TTATGCAGCC GCGCGCGGGG CAGGGCGCGC TGTCGCTGCC CGGCGACGTG
GTCGACGCGG CCGGCGCGCC CGTGGTCGGC GCCGTGGTCA CGGCGCAGTT CGAGCTCGGC
CCCGGGCTCA CGCCGGCAGC CGCGCCCGCC CCCGCAGCGA CGACCGGGTC GGGCGCGGAA
TCCGCTGCCG AGGAGCCGGC CGCGGCCGAC GTCGTTGACG ACGCGCAAGC CGGCGCCGCC
CCCAGCTCCG CAGCAGACGA CGCGCCCGAC GACGCTGCTG GCGAGCCCGC GACGCTGGTG
ATCGACACCG AGCCCGCGAT CGTGGCCATC ACCGACGCGG CCGGCGTGTT CACGCTCGCG
GGGCTGCGTC CCGGGCGCTA CCGGCTGCGC GTCGAGGCCG ACGGCATCTT CCCCTCCGAG
GTGCGCTTCT TCGAGGTCCC GGCCGAGCGC GTGCGCCTGG TGGTGGCGCG CGAGGTCGAG
GTTGTCGGAC GCGTGGTCGA AGGTGCCGCG CCGGCGCCCG GGGTGCCGGT GACGCTGCTC
GAGAACGACG TCATCCTGGC CCGGACGAGC TCGGACGAGG ACGGCGGCTT TCGCTTCGCG
GGGCTGAGCG AGGGCGTGTT TCAGGTGTGG GCCGGGGCCG GGGAACGCGC CAGCCCGGCG
ATGGTGGCGG TGCGCCTGGG CGCGGGTCCC TTCGAACCCA TCACGCTGGC GCTCGAGCCC
GCGGTGGTGG TCACCGGCCG GGTCATCGAT CGCCAGAGCG AGTCGGGTCT GCGCGCGGTG
GTGGCGCTGG CCGCGCTGGG GCCCGAGCAG CCCATGCGCT ACGGCCAGAG CGACAGCTCG
GGCGGCTTCC GCATCGAGGC GGTGCCGCCC GGTCGCTGGA GCATCCAGGC GTGGTCGCCG
GGCTATCTCA GCCGCGAGGC GGTGGAGTTC GAGGCCGCGC TGACGAATCC GGTGCGTCCG
GTGATCGCGC TCAGCCCCGG CGGCGTGCTC GCCGGACAGG TGGTCGACGG TGCCGGCACG
CCGGTGGCCG GGGCCACGGT GCGCGCGCGC GGCCGCGACA GCGCCGGCCA GAACACGCTG
GTGAGCGCGC AGGGCGACCT CGACCGCGTG CGCCGGCTGC GCGGCGATCC GCCGCTGAGC
GAGGTGCCGG CGGGGACGCG CTTTCTGGCC CGCGGCGAGC TGGGCGTGCT GCTCGGGCCC
ATCCCGTTTC CGCCGCCTCC AGGCGCGGCC ACGGTGCGCG TGGCCGAACC CGCGCTCGGC
CCGGGCGACG ATACCGCGAC CTCCGGCGAG GACGACGCGG CGCCGGTGTC GGCCGAGGCC
GCCATCGCCG CGCTGGCCGA TGGCGAGGAT CTCGGCGTCT ACGTCACCGA TACGCAGGGG
CAGTTTCGCA TCACGGGCGT GCCGCCCGGT AGCTTCCGCG TGATCGCGTC GCACCCGGAC
TACGCCGAGG GCAGCAGCGA CGCTCTGCCG GTGGCCCTGG GCCAGCGCCG CGACGATGTG
CGCGTGGTGC TGCGCGCGGG CGTGGTTCTC GTCGGCACGG TCGAAAACAA CCGCGGCGAG
CGCATCATCG GCGCGGCGCT GGCGGCCGAG CCCGCGGGTG CCAGCGCTGA GGGGGCCGGG
GGCGCGGGCG TGGGCGGCGC GCGCGTGCTG GCGGTGACCG GCACCGACGG CCGCTACCGC
CTGGGCCCGG TGACCGGGCG GGTGCGCGTG AGCGTGAGCG CGGCCGGCCA TGGCGACGCC
GAGCGCGTGC TCTCGGTGGC CGAGGCCGAG GCCGAAGCCG CGGCCGCGGG ACGCGCGCCC
GACGAGCGCG TCGAGGACTT CGTGCTCACG GTGGCCGACG CCGAGCTGGC CGGGCGCGTG
CGCGACAGCT CGGGCTTTGC CGTGCGCGGC GCGCGCGTGC GCATCACGGG CGCGGCCGGG
GCCACGCCCG CGCTCTCGGC CGAGGGCCGC GCGGCCACCA CCGACGACGC CGGCCGCTTC
GCCATCGCCG CGCTGGCCCC GGGCCGCTAC CGGGTCGAGA TCAGCCACCC CGGGTTTCCC
ACGCGCACGG CCGAGGCCGG CACCGAGGAG GGCGCCGAGC TGAGCCTGGT CTTCGGCGGC
GGCATCGACG GCCAGGTCCG CGACCAGCAC ACGCGCGCGG CCATCGCCGG GGCGCGCGTG
CTGGGCACCG GCCCGGGCGG CGCGCGCCGC GAGCTGAGCG CGGGCGACGA CGGCGGCTTC
TCGCTGGTGC CCGTGGTCGC CGGGGTGTGG ACGCTGAGCG CGAGCGCGCC CGGCTACGTG
CCGGCGGCGC CGCTGCGGGT CGAGGTCGCG GCCGCCACCG AGCCCGCTCA GGTCACGGTC
CGCGATGTCC GCCTGGATCT GGCGCGCGGG GCCACGGTGG CCGGCACGGT GCGCGACGAG
AACGGCCAGC GCGTGGCCGG CGCCCGGGTG CGCGCGGGCC AGGCCGAGGG CCGCAGCGAC
GCCGAGGGCG GCTTCCGCCT CAGCGACGTG CCCACGGGCG ACACCCGCAT CACGGCCGAG
CTCGAGGCGC GGCGCGGCAG CACCACGGTG TCGCTGGGTC CCGGCGACGA GGTCGTGACC
CTCGAGATCC GCATCGAGTG A
|
|---|
| Protein sequence | MKFPRLLSRR AAILAAAGIV LVLGGVLGWF LWPEPPGSLP LSDPTAPQDD PRNPLLTPGP
RPELMQPRAG QGALSLPGDV VDAAGAPVVG AVVTAQFELG PGLTPAAAPA PAATTGSGAE
SAAEEPAAAD VVDDAQAGAA PSSAADDAPD DAAGEPATLV IDTEPAIVAI TDAAGVFTLA
GLRPGRYRLR VEADGIFPSE VRFFEVPAER VRLVVAREVE VVGRVVEGAA PAPGVPVTLL
ENDVILARTS SDEDGGFRFA GLSEGVFQVW AGAGERASPA MVAVRLGAGP FEPITLALEP
AVVVTGRVID RQSESGLRAV VALAALGPEQ PMRYGQSDSS GGFRIEAVPP GRWSIQAWSP
GYLSREAVEF EAALTNPVRP VIALSPGGVL AGQVVDGAGT PVAGATVRAR GRDSAGQNTL
VSAQGDLDRV RRLRGDPPLS EVPAGTRFLA RGELGVLLGP IPFPPPPGAA TVRVAEPALG
PGDDTATSGE DDAAPVSAEA AIAALADGED LGVYVTDTQG QFRITGVPPG SFRVIASHPD
YAEGSSDALP VALGQRRDDV RVVLRAGVVL VGTVENNRGE RIIGAALAAE PAGASAEGAG
GAGVGGARVL AVTGTDGRYR LGPVTGRVRV SVSAAGHGDA ERVLSVAEAE AEAAAAGRAP
DERVEDFVLT VADAELAGRV RDSSGFAVRG ARVRITGAAG ATPALSAEGR AATTDDAGRF
AIAALAPGRY RVEISHPGFP TRTAEAGTEE GAELSLVFGG GIDGQVRDQH TRAAIAGARV
LGTGPGGARR ELSAGDDGGF SLVPVVAGVW TLSASAPGYV PAAPLRVEVA AATEPAQVTV
RDVRLDLARG ATVAGTVRDE NGQRVAGARV RAGQAEGRSD AEGGFRLSDV PTGDTRITAE
LEARRGSTTV SLGPGDEVVT LEIRIE
|
|---|
| |