| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3460 |
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| Symbol | |
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| ID | 8545849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4779671 |
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| End bp | 4781080 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388128 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003267855 |
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| Protein GI | 262196646 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.617969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.241988 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCCA CCCCCAAACT GGTCCGCCTG GTCGCCCGCA ACCTGGCGCG CAGCCCGCGC
CACTTCGCGC TCAGCGCCTT TGGCATCGTC GTCGGCATCG CCGCATTCGT GTTCTTCCTG
GGCCTCTCGC TCGGGGTCAA GAGCGTGGTC CTGGGCGAGC TCTTCCCCGT CGATCGCGTC
GAGGTGGTGG CGCCGCGGGC CTCGTTCCTG GGCAAGGACC TCACCAAGAA GCTCGACGAC
CAGGTGGTCG AAACCATCCG CACCCGGCCC GGCGTCGGCA TGGTGGTGCC GCGCATGAGC
ATGGCCTTTC CCGCCACCGG CGAGGCCTCC TTCGAGGGCC ACGCGCTGCG CTTCGAGGTC
GGCGGTTTCG CCGACGGCAT CCCGGCCGAG CTGCTCGAGG ACGAGGGCTA CGCCGACATG
TTCCGCGACT GGGAGGCCGA GGCCGAGGGC GCCGAGCGCG CGCCCTGCGG CCCGGCGCCG
AGCTACACCT GCGACAACGC CGAGCGCTAC TACTGCGACC TGCGCGAGCG CCGGTGCCGC
CACCGCGTGC CCGTGATCGT CTCGCCGACC CTGCTCGAGC TGTACAACGG CCAGTTCGCG
GCCTCGCACG GGCTGCCCGT CATCGGCCAG CTCGAGACCT TCATGGCCAC CCGCGGCGGC
CTCGGCAAGA TGCGCTTCGC CATCGGCCTG GGCGACACCA TGGTCGCCGG CTCCACCGTG
TCGGTGCCGG CGAGCAAGCA GCGCACGGTC GAGGGCATGC TGCTCGGCAT CAGCAGCAAG
GCCATGAACA TCGGCATGAC CGTGCCCATC GGCTACATGG AGCGCTGGAA CCGCGAGTAC
GCGGGCGAGG CCGCGGCCAG CTCGTACTCG TCCATCGTCG TCCAGATGGA CGACAAAGAC
CAGCTCGCGC CGCTGTCGGC GTGGCTCGAG AGCGCGCTCG ACCTGCGCCT GGCCGACTCC
ATGGGCGAGC GCTTCGCCAC CGCCATCTTC GTCGTCACCT CGCTGTTCGT GCTCATCTCG
TTCCTCATCG TCGCCATCTC GGCCATCAAC ATCGCGCACA ACTTCTTCAT GCAGGTGAGC
GAGCGCCGGC GCGAGATCGG CGTGCTGCGC GCGGTCGGCG CCACCCGCGG CGACATCGGC
CTCATCCTGC TCGGCGAGGC CGCCCTCATC GGCGCGCTCG GCGGCCTGCT CGGCGTCGGC
CTGGCGCGCG GCGTGGCCGC CCTGGTCGAT TGGGCCTCGG CGCGCTGGCT GCCGGCGTTC
CCCTTCAAGC CCGAGACCTA CTTCGAGTTC CCGCTGTGGC TGGTGGCCGC CGGCCTGGGC
TTCGCCGTGC TGTTCTGCGT GCTCGGCGGG CTGCTGCCGG CGCGCAAGGC CGCGTCCGAG
CCGCCCGCGC GCGCGCTCGT CCAGCAGTGA
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| Protein sequence | MMPTPKLVRL VARNLARSPR HFALSAFGIV VGIAAFVFFL GLSLGVKSVV LGELFPVDRV
EVVAPRASFL GKDLTKKLDD QVVETIRTRP GVGMVVPRMS MAFPATGEAS FEGHALRFEV
GGFADGIPAE LLEDEGYADM FRDWEAEAEG AERAPCGPAP SYTCDNAERY YCDLRERRCR
HRVPVIVSPT LLELYNGQFA ASHGLPVIGQ LETFMATRGG LGKMRFAIGL GDTMVAGSTV
SVPASKQRTV EGMLLGISSK AMNIGMTVPI GYMERWNREY AGEAAASSYS SIVVQMDDKD
QLAPLSAWLE SALDLRLADS MGERFATAIF VVTSLFVLIS FLIVAISAIN IAHNFFMQVS
ERRREIGVLR AVGATRGDIG LILLGEAALI GALGGLLGVG LARGVAALVD WASARWLPAF
PFKPETYFEF PLWLVAAGLG FAVLFCVLGG LLPARKAASE PPARALVQQ
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