Gene Hoch_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3413 
Symbol 
ID8545801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4712041 
End bp4713039 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID646388080 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003267808 
Protein GI262196599 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.919523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0784108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACGCCCGCCC CGCCAGCGCC CTGCGCTGCG CGCTCACCGA AACCCGCAAC 
GTCTTCCCCA TGCCGGCCTC GCTGGGCGAC CTCGCCGCGC TCGACGGACG CATGGACGAG
ATCCGCACGG CCAACGTCAC CCACCACCTG GAGCTGTGCG CCATCGCGGC CAGCCGCGGC
GTGCAGGTGC TGGGCATGGG CGAGCTCTTC CCCGCCCCCT ACTTCGCCCT GCACTGCGAC
CCGCGCTGGC GCGAGCTGGC CGAGGACGCG CGCACCGGGC CCACGGTCAC GGCCCTGCGC
GTGGCCGCGC GCACCCACAA GATGGTCCTG GTGGCGCCGA TCTACGAGCG CTGCGCCGAC
TCGGGCAAGT GCTTCAACAC CGCCGTGGTC ATCGACCAGG ACGGCGAGAT CCTCGGCAGC
TACAAGAAGA CGCACATCCC CCAGGGGACC AACGAACAGG CCAGCTTCGA GGAGACCTAC
TACTACGAGC GCTCCGACGG TCGCCTGCTC AGCTCGCCGG CCAACGTCTC CGACAATGCG
TTCTTCCCGG TGTTTCAGAC CGCGCTCGGG CGCATCGCCG TGGCCATCTG CTACGACCGC
CACTTCGAGG GCGTGATGCG CACGCTGGCC GAGCAAGGCG CCGAGCTGGT GCTGTCGCCG
GCCGTGACCT TTGGCGCCAA GTCCGAGCGC ATGTGGCCGC TCGAGTTCGC GGTCGACGCC
GCCCGGCACG GGCTGTTCAT CGGCGGCTCC AACCGCCGCG GCAGCGAGCC GCCATGGAAT
CAGCCGTATT TCGGTGGCAG CCACTTCGTC GGCCCCGGCG GCGCCTGCGA AAACCTCAGC
GACCACGACG AGCTGATCAT CGCCGACCTC GACATGGACG AGCTGCGCCG CCCCGATCCC
TCGGGCTGGA ACCTGCCGCG CGACCGCCGC CCGGACATCT ACGCGCCGCT GGTCCAGGCG
TCCGAAGACG ACGCCGACGA CAGCTCGGAG GCGGGCTGA
 
Protein sequence
MSTDARPASA LRCALTETRN VFPMPASLGD LAALDGRMDE IRTANVTHHL ELCAIAASRG 
VQVLGMGELF PAPYFALHCD PRWRELAEDA RTGPTVTALR VAARTHKMVL VAPIYERCAD
SGKCFNTAVV IDQDGEILGS YKKTHIPQGT NEQASFEETY YYERSDGRLL SSPANVSDNA
FFPVFQTALG RIAVAICYDR HFEGVMRTLA EQGAELVLSP AVTFGAKSER MWPLEFAVDA
ARHGLFIGGS NRRGSEPPWN QPYFGGSHFV GPGGACENLS DHDELIIADL DMDELRRPDP
SGWNLPRDRR PDIYAPLVQA SEDDADDSSE AG