Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3408 |
Symbol | |
ID | 8545796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4706359 |
End bp | 4707372 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646388075 |
Product | diphosphomevalonate decarboxylase |
Protein accession | YP_003267803 |
Protein GI | 262196594 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3407] Mevalonate pyrophosphate decarboxylase |
TIGRFAM ID | [TIGR01240] diphosphomevalonate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0207925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.138111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCC CCCACGGCGC CGCCCGCGCC CGCGCCCACG CCAACATCGC CCTGATCAAG TACTGGGGCA AGCGCGACCG CGCGCGCAAC CTGCCCGCCG CCGGCAGCTT GTCGCTCACC CTGGCCGCTC TGACCACGAC CACGAGCGTG CGCTTCGACC CCGCCCTGGC CGGCGACCGC CTGGTTCTCG ACCACCGGGT CGAAGACGGC AAGGCGCTGG CGCGGGTGAG CGCGTGGCTC GACCTGGTGC GCGCCCAGGC CGGCATCGAC ACCCGCGCCG AGGTGGTGAG CGCGAACGAC TTCCCGACCG CCTCGGGGCT GGCGTCATCG GCCTCGGCCT ACGCCGCGCT GGCGCTGGCG GCGACGCGCG CTGCCGGCCT CACGCTCGAC CAGCGCGCGC TCAGCATCCT GGCCCGGCGC GGCTCGGGCT CGGCCGCGCG CTCGATCTAT GGCGGCTTCG TGCGCATGCA CGCCGGCGCG CGCGACGACG GCAGCGACGC CTACGCCGAG GCGCTCGACG AGGCCGGCGA TTGGCCGCTG CGCATGGTCG TGGCCGTGGT CGGCGGCGGC CAGAAGAAGA CCCACGGCTC GCGCGATGCC ATGGAGCACT GCGCGGCCAC CTCGCCGCTC TACGCCGGCT GGCTGAGCTG CGTGCCCGGT GACCTGGACA GCGCCGCGCG CGCCATCGCC GCCCGCGACT TCGACGCTCT CGGACAGGTG TCCGAGGCCA ACGCCCTGGC CATGCACGCC GCCGCCCTGG CCTCGCGCCC GGCCATCGTC TACTGGCAGC CGGCCACGCT CGCGTGCCTG AGCGAGGTGC GCGCGCTGCG CGAGCGCGGC GTCGGCGCCT ACGCCACCAT GGACGCGGGC CCGCACGTCA AGGTGCTCAC GCGCGCGGAC GACGCCGAGG CCGTGGCCGC CGCGATGCGC AGCGTGCCGG GCGTGAGTGA CATCATCACC AGCACCAGCG GCGGCGGCGC CCGTGTGCTC GAGGCCGATG GCGCCGGCGC CTGA
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Protein sequence | MSSPHGAARA RAHANIALIK YWGKRDRARN LPAAGSLSLT LAALTTTTSV RFDPALAGDR LVLDHRVEDG KALARVSAWL DLVRAQAGID TRAEVVSAND FPTASGLASS ASAYAALALA ATRAAGLTLD QRALSILARR GSGSAARSIY GGFVRMHAGA RDDGSDAYAE ALDEAGDWPL RMVVAVVGGG QKKTHGSRDA MEHCAATSPL YAGWLSCVPG DLDSAARAIA ARDFDALGQV SEANALAMHA AALASRPAIV YWQPATLACL SEVRALRERG VGAYATMDAG PHVKVLTRAD DAEAVAAAMR SVPGVSDIIT STSGGGARVL EADGAGA
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