| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3314 |
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| Symbol | |
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| ID | 8545702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4573325 |
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| End bp | 4574005 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646387981 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003267709 |
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| Protein GI | 262196500 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.160509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.206226 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCG CTCGCCCGCC CGCTCCGGCC GAGGTGTGCG CGACCGTGGC TGAGCCCGCC
ATCGATCCCC GGGTCACGGC CGCGGCCAGC GGCGACCGCG CTGCGGCCCA GGAGCTGCTC
ACCGAGCTGA TGCCGCGGGT GCGCAACCTG GTCCGCTACC TGGTCCGCGG CGACCGCGAG
GTCGACGACA TCGCCCAGGA GGCGCTGATC GCCATCGCCC GCGGCTTCGC CAGCTTCCGC
GGCGAGGGCG CGCTGAGCGC CTGGGCCGAC CGCATCACGG CGCGCGTCAC CTTCGCCCAC
CTGCGCCGCG CCCGCCGCGA CCCCGCGCAG GTGACCAGCG TGGCCGCCGA CCTCGCCGCC
GTGCCCCACC CCGGCGCCGG CCCCGATCAA TACGCCTCGC GCCGCGAGCT GGTCGGCCTG
CTCGACGAGG TCTCGGACGA GCAGCGCCAC GCGCTGGTGC TGCACCACGC CCTGGGCCTG
AGCGTGCCCG AGATCGCGGC ATCGCTCGAG ATCTCACCCG AGACCGTGCG CAGCCGACTG
CGCCTGGGCA AAGCCAAGCT GCGCGCGCTG CGCCAGCAAC AGCGCGACGA CGACGAGGCC
CGCGCCGCGC ACCGTGACGC TTCCGCGGAC GACGCCGAGG GCATCGTCCG GACCGCTACG
AGAAGGGAGT TGCGACCATG A
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| Protein sequence | MSSARPPAPA EVCATVAEPA IDPRVTAAAS GDRAAAQELL TELMPRVRNL VRYLVRGDRE
VDDIAQEALI AIARGFASFR GEGALSAWAD RITARVTFAH LRRARRDPAQ VTSVAADLAA
VPHPGAGPDQ YASRRELVGL LDEVSDEQRH ALVLHHALGL SVPEIAASLE ISPETVRSRL
RLGKAKLRAL RQQQRDDDEA RAAHRDASAD DAEGIVRTAT RRELRP
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