Gene Hoch_3293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3293 
Symbol 
ID8545681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4538498 
End bp4539088 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content74% 
IMG OID646387960 
ProductClass I peptide chain release factor 
Protein accessionYP_003267688 
Protein GI262196479 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.214726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.360325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAAT TCGTCGCGCT CCTGGCCGAG GAGCTGCAAA CGCGCTGTCG CGCGGCCGGG 
CTGAGGATCG GCGCGGTGAG CACGCACGGC AATGACGAGT CGCCGCGCTC GGTGGCGTTC
ACGGTGTCGG GAGCGGTGAG CGCGGCCTTG GCCGGTTTTG TCGGCACGCA CGTGTTGGTC
GCGCGCAGCT CGCGACGCGG ACGGCGTGCG CGCAAGCGCT GGTTTGCCGG GGTGAGCATT
CACGCGCAGC AGGCGGCGAC GGCGGTGGCA GAGATTCGGC CGGACGAGGT CGAGGTCACC
GCCTCGCGCG CAGGCGGGCC CGGCGGCCAG CACGTCAACA CCACGGACTC CGCCGTGCGC
GTGCGTCACA AGGCCTCGGG CATCAGCGTG CGTGTGGCCG GCGAGCGCTC GCAGCACCGC
AACCGCAGCG TGGCGCTGAC CCGGCTGCGC GAGCTGCTCG GCGAGCGCGA GCAGCGCGAG
CGGGCCGAGC GCGCCAAGCG GCGGCGGCGC GCGCACTATC AACTCGAACG CGGCGGCGCG
GTGCGGGAAT GGCACCTCGA TGAGCGCGGC GCCGGGCTGC GGCCCGCGTA G
 
Protein sequence
MREFVALLAE ELQTRCRAAG LRIGAVSTHG NDESPRSVAF TVSGAVSAAL AGFVGTHVLV 
ARSSRRGRRA RKRWFAGVSI HAQQAATAVA EIRPDEVEVT ASRAGGPGGQ HVNTTDSAVR
VRHKASGISV RVAGERSQHR NRSVALTRLR ELLGEREQRE RAERAKRRRR AHYQLERGGA
VREWHLDERG AGLRPA