| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3248 |
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| Symbol | |
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| ID | 8545636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4472517 |
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| End bp | 4477145 |
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| Gene Length | 4629 bp |
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| Protein Length | 1542 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646387915 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_003267643 |
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| Protein GI | 262196434 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.151013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCCC CCGACACCCC CGCGCGCGCG CCACTCGACG TGAGCCGCGC CTTCGACGGC
AAGAACATCC TCCTCATCGG CTCCACCGGC TTCGTCGGCA AGGTGGCCCT GTCGATGCTC
CTGCGCCACT ACCCCAACGT GGGCCGGGTC TACGCGCTGG TTCGCCCGGG TATGGGCAAC
AGCGCCGAAG AGCGCTTCTT CAGCAAGGTG GCGGCCTCGC CGGCTTTCGA TCCGCTGCGC
GAGGTGTGGC AAGACGGCTA CGAGAGCTTC CTGCGCGAGA AGATCGTCCC GGTCGCCGGC
GACATCGGCC GGCCGCTGTG CAACTTCGAC GACGCTCAGT TCGAGCGCTT CGCCGAGGGC
AACGGCCTCG ACGTGATCAT CAACTCGGCC GGCCTGGTGT CGTTCACGCC GCCGCTCGAG
AGCGGCCTGC GGATCAACGC GCTGGGCGCC AAGAACGTGC TCGAGGCCGC GCGCCGCGCG
GGCGCGGGCC TGGTGCACAT CTCCACCTGC TTCGTGGCCG GGCGCCGCGA CGGCGACGTG
CGCGAGGACG AGCCCGTGGT CGGCTACTTC CCGCGCCAGG ACGAGCTCAA CACCTACGAC
TTCTCGGCCG AGGACGAGAT CGCCGACTGC CTGCGCATCA TCGATCAGGT GCGCGCCGAG
GCCAACGACC GCGCCCACAT CTCGCACTTC CGCGAGCTGG CCGCCGAGAC CCTGCGCAGC
CAGCGGCGCG ATCCCGAGGA CGAGAGCAAC CTGCGCCTGG CCGTGGCTCG TGAGCGCAAG
CTGTGGGTGC AGCAGCGGCT GCGCGAGGTC GGCCAGGAGC GCGCCGATCA CTGGGGCTGG
ACCAACACCT ACACCTACAC CAAGTCGCTG GGCGAGCAGG TGGTGCTCGA CCAGGACGAC
GTGCCCGCGT GCGTGGTGCG CCCGGCCATC GTCGAGTCGG CCGTGCGCTT CCCGTTCCCG
GGCTGGAACG AGGGCTTCAA CACCACGGCG CCGCTGGTGT ACCTGGTGCT CAAGGGCCAC
CGCCAGATCG TCTCGGGCGA TCGCACCCCG CTCGACGTCA TCCCCGTCGA CCTGGTCTGT
GCCGGCGTCC TGCAGGCCGC GGCCGCGGTC ATCGACGGCC GCCACGAGCC CGTGTATCAG
TGCGGCTCGA GCGACATCAA CCCGGTGTTC ACCTCGCGCC TCACCGAGCT CACGGCGCTG
GCCGTGCGCC GTCACTTCCG GCAGCTCGCC GACGACGGCG AGAACCCGAT CGAGAACCGC
ATCCGCGCCC GGCTCGAGGC CTTTCCGGTG TCCGAGCAGC GCTTCGAGAC CTTCAGCGCG
CCGCAGGTCA AGCGCGTGGC CACCGGCCTC ACCCGGGCCA TCGACAAGCA CCTGCCGCGC
TGGGGCGCGC CCCGGCTCAC GGCCACGGCC GAGCGGGTCA AAGACCGTCT CGGACGGGTG
TCCGAGTTCA CCGATCAGGC GCTCGAGCTC ATCAACCTGT TCAAGCCCTT CACCCACGAC
CACTGGCTGC ACTTCCGCTG CGACAACACC CGGGCCCTCA ACGCCCAGCT CACGCCGCAG
GACCAGCAGG CGCTGCGCTG GGATCCCGAC GCCATCGACT GGCGCTCGTA CTGGCTCGAC
TACCACTTTG CCGGCCTGCA GAAGTGGGTG TTCCCCATCC TCGACGACGA GTTCGGCCCG
CAACAGCGCT CGGTCTACAC CCACAAAGAC CTGATGGAGC TGTTCGACGC CACCACCAAG
CTGCACCGCC ACCGGGTGGC CCTGCGGCTG TTGCCGCCGG CCTCGGACGA GGACCGCGAG
CCCGTGGTCT ACACCTACGG CCGGGTCCAG GACATGGCGC TGCAGGGCGC GGCCGCGCTG
CGCGAGCGCG GCGTGGGCCA GGGCGACCAC GTCATGCTGA TGAGCGAGAA CCGGCCGGCC
TGGGGCATCA GCTACTTCGC GATCCTCAAG GCCGGGGCCA CGGCGGTGCC GGTCGACGCC
CAGCTCTCGC TGGCCGAGGT CGAGAACCTG CTGCGCGCCT CGGGCGCCAA GGTGCTGATC
CTCTCCACCC GCGCCGCCGA CCGCCTGCTC ACCGATGAGG GCGTGGCCCT GCCGCTCGCC
AGCGCGGCCG AGGACAGCGC CGAGGGCGAC AGCACACCGC CGCTCGACGG CCGGCGCTGG
CGCCGCGCCG CGCACTCCAC CGACAGCGCG TCCGAGATCG AGGAGGGCGT GCTTTTCGGC
GCGCTGTCGC GGCTGCTCGC CGACCGCGGT CTGGGCGAGG TCGAGGTCGC CGGCTTCGAC
GACATCCTGG CCGAGCCGCG GGCGACCCCG GCCGGGCCGC CGATGCGCCG CCTGGGCGAG
ACGGTGGCCT CGCTGATCTA CACCTCGGGG ACCACGGGCG CGCCCAAGGG CGTGATGCTC
ACCCACAAGA ACTTCACCTT CATGGCCGCC AAGATGTCGA GCGTGTTCCG GCTGTTCCTG
CACGACAGCC TGCTCTCGGT CATCCCCCTG CATCACACCT TCGAGTTCTC GGCCGGCTTC
CTGATGCCCT TTGTGCACGG CTCGTCGATC ACCTACCTCG ACGAGATCGA CGCCGACAAC
CTCAGCGCCG CCTTCCGCGA GAGCCGCATC ACCGGCATGG TCGGCGTGCC GGCGCTGTGG
CAGCTCCTCA ACCGCCGAAT CTTCAAGACC GTGAGCGAGC GCGGCCTGCT GGTGCAGCGC
GCCTTCGAGG CCATCGTCGA CGTCAACCGC CGGCTGCGCG ACAAGACCGG CATCAACATC
GGCCGGCTGC TGTTCTGGCC CGTGCACCTG CGCCTCGGCG GCCAGCTCCG GCTGCTGATC
AGCGGCGGCT CGGCGCTGTC CAGCGATTTG CACAAGTCGT TCCGCGGCCT CGGCTTCGAG
ATGCTCGAGG GCTACGGCAT GACCGAGTCG TCGCCGGTGC TCACCGTGCA GCGCATCGAG
GACACCCCCG TGCTCGGCAG CGTCGGCCGG GCGCTACCGG GCGTCGATGT GCGCATCGAC
AGCCCCGACG GCAGCGGCGT CGGCGAGGTG GTGGCCAAGG GCAACAACGT GATGGCCGGC
TACTACCAGA ACCAGGACGC CACCGACGAC ATGCTGCGCG ACGGCTGGCT GCATACCGGC
GATCTCGGAC GCATGGACGA CGATGGCAAC CTGTACATCG TCGGCCGCCG CAAGGAGATG
ATTCTCGGAC CGGCGGGCGA AAATGTCTAC CCGGACGAAC TCGAGGAGCT GTACCGCGAC
TCGCCCTACG TCAAGGAGCT GTCGATCGTC GGCCTGCCCA GCGGCGACGG CGAGACCGTG
GCCGCCCTGG TCGTGCCCGA CTACGAGAAG GACGAGCGCG AGGTGGTGCG CGAGCGCGCG
CGCCAGCACA TGGCCGAGGT GTCCAAGCAG TTGCCGCTGT ACAAGCGGGT CAAGATCTTC
CACCTGTGGG ACTTCGACCT GCCGCGGACC AGCACCCGCA AGGTCAAGCG GCGCGAGGTC
GTGGCCGAGC TGCAGCGCCT CGAGCGCGCG CTGGCCACCG CCCGCACGGC CGCGGCCGAG
GCCGGCGGCG AGGGCGCGGG CAAGGGCCGC GGCGGCAAGC CGGGGGCGCG CGACGGCGCC
TGGGTGCGCG CGCTCCTGGC GCAGGTGGCG CAGAAGCAGC GCGCCCAGGT GCAGCCCGAG
ACCACGCTGG CCGACCTCGG CTTCGACTCG CTGATGTTCA CCGAGCTGGG CGTGGCGCTG
GAGAAGAGCG GCGTGGACGT GCCCGACCCG GCCGTCATCC TCGAGCTGCA GACCGTGGCC
GACGTCGAGC GCTATCTGGC GCAGCAGGAG AACGCCACCC GGCAGCGCAA GAGCATCGAG
AAGATGACCC GCAACAGCAA GCAGCTCGAG CGCGGCGACG ACGACGAGAT CCAGATCTCG
CCCCTGGTCG CCCACCTGGG CCGGCGCGGC CTGCGCATGG GTCTGCGCAT GCTCTACGAC
CGCGTGCTGC ACACCGACGT GCGCGGCGAG GCCCACGTGC CGCCCTTTGG CGGCTACATC
GTGGCCGCCA ACCACGCCAG CCACCTCGAC ATGGGCCTGG TCAAGCACGC CCTGGGCGAG
ACCGGCGACC TGGTGGTGGC GCTGGCGGCC AAGGACTACT TCTTCGAAGA TCCGGTGCGC
CGCGCCTACT TCGAAAACTT CACCAACCTG GTGCCCATGG AGCGCTACGG TTCGCTGCGC
GAGTCGCTGC GCCTGGCCAG CGACGTGCTC CGCGACGGTC ACATTTTGCT GATCTTCCCC
GAGGGCACGC GCAGCAAGGA CGGGGTCATG GACGCGTTCC TGCCCTCGCT CGGCTACCTG
GCCATGCAGA ACCGCTGCGG CATCCTGCCC ATGTATCTGG CCGGCACCCA CGACGCCATG
CCCAAGGGCG CCTTCCTGCC CAAGCAGCGC GAGGTCTCGG CGCACATCGC GCCCTTCCTC
ACCTACGAGC AGGTCCAGGG GCTGGCCGCG GGCAAGAGCC GCAGCGCGGC CTACCGGGCC
ATCTCCCAGC AGGTCGAGGC GCGCGTGCGC AAGCTGGCCC CGGCCGAGTA CGAGTGGACC
CTGGGCGAGG CCGGGCGCAC GCCGGCCGGC GAGCCGGCGC AGCCGCCGAG CGACGAGGAG
CGAAGCTAG
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| Protein sequence | MSSPDTPARA PLDVSRAFDG KNILLIGSTG FVGKVALSML LRHYPNVGRV YALVRPGMGN
SAEERFFSKV AASPAFDPLR EVWQDGYESF LREKIVPVAG DIGRPLCNFD DAQFERFAEG
NGLDVIINSA GLVSFTPPLE SGLRINALGA KNVLEAARRA GAGLVHISTC FVAGRRDGDV
REDEPVVGYF PRQDELNTYD FSAEDEIADC LRIIDQVRAE ANDRAHISHF RELAAETLRS
QRRDPEDESN LRLAVARERK LWVQQRLREV GQERADHWGW TNTYTYTKSL GEQVVLDQDD
VPACVVRPAI VESAVRFPFP GWNEGFNTTA PLVYLVLKGH RQIVSGDRTP LDVIPVDLVC
AGVLQAAAAV IDGRHEPVYQ CGSSDINPVF TSRLTELTAL AVRRHFRQLA DDGENPIENR
IRARLEAFPV SEQRFETFSA PQVKRVATGL TRAIDKHLPR WGAPRLTATA ERVKDRLGRV
SEFTDQALEL INLFKPFTHD HWLHFRCDNT RALNAQLTPQ DQQALRWDPD AIDWRSYWLD
YHFAGLQKWV FPILDDEFGP QQRSVYTHKD LMELFDATTK LHRHRVALRL LPPASDEDRE
PVVYTYGRVQ DMALQGAAAL RERGVGQGDH VMLMSENRPA WGISYFAILK AGATAVPVDA
QLSLAEVENL LRASGAKVLI LSTRAADRLL TDEGVALPLA SAAEDSAEGD STPPLDGRRW
RRAAHSTDSA SEIEEGVLFG ALSRLLADRG LGEVEVAGFD DILAEPRATP AGPPMRRLGE
TVASLIYTSG TTGAPKGVML THKNFTFMAA KMSSVFRLFL HDSLLSVIPL HHTFEFSAGF
LMPFVHGSSI TYLDEIDADN LSAAFRESRI TGMVGVPALW QLLNRRIFKT VSERGLLVQR
AFEAIVDVNR RLRDKTGINI GRLLFWPVHL RLGGQLRLLI SGGSALSSDL HKSFRGLGFE
MLEGYGMTES SPVLTVQRIE DTPVLGSVGR ALPGVDVRID SPDGSGVGEV VAKGNNVMAG
YYQNQDATDD MLRDGWLHTG DLGRMDDDGN LYIVGRRKEM ILGPAGENVY PDELEELYRD
SPYVKELSIV GLPSGDGETV AALVVPDYEK DEREVVRERA RQHMAEVSKQ LPLYKRVKIF
HLWDFDLPRT STRKVKRREV VAELQRLERA LATARTAAAE AGGEGAGKGR GGKPGARDGA
WVRALLAQVA QKQRAQVQPE TTLADLGFDS LMFTELGVAL EKSGVDVPDP AVILELQTVA
DVERYLAQQE NATRQRKSIE KMTRNSKQLE RGDDDEIQIS PLVAHLGRRG LRMGLRMLYD
RVLHTDVRGE AHVPPFGGYI VAANHASHLD MGLVKHALGE TGDLVVALAA KDYFFEDPVR
RAYFENFTNL VPMERYGSLR ESLRLASDVL RDGHILLIFP EGTRSKDGVM DAFLPSLGYL
AMQNRCGILP MYLAGTHDAM PKGAFLPKQR EVSAHIAPFL TYEQVQGLAA GKSRSAAYRA
ISQQVEARVR KLAPAEYEWT LGEAGRTPAG EPAQPPSDEE RS
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