| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3247 |
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| Symbol | |
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| ID | 8545635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4471613 |
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| End bp | 4472137 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646387914 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003267642 |
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| Protein GI | 262196433 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0405912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.391395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACG CCGTCACCTA CTTCCATCAC TGCTCCACCA GCCGCGAGGC CATCATCGCC
AGCCACGAGC GCAGACGCTC CGAGGATGAG GGAGCCCCAC AAACCCAGGC CGAGTTCGCG
GCCGACCTGT GGTACGCGCG CGGCTACGAC GCCGAGCTGA GCGACCCGCA CGCCGCTGAG
GCCGCCTACG CCTGCGCGCT GGCCCACGAT CCCTACCACT CGGCCGCCCA CGCCAACTAC
GGCCGCCTGC GCCACGCGCT CGGCGACTTC GCCGCGGCCG AGGAGCACTA CCGCCGGGCG
CTCGAGCTCG ACCCCGAGGA GCCGCTGTTC TGGTACAACC TCGGCGTCGT GCTCCAGGAC
CGCGACCAGC GCGAGCAGGC CATCGTCGCC TACCGCCGCT GCCTGCGCGT CGCGCCCGGC
TTTGGCGACG CGCACTTCAA CCTCGCCGGC CTGCTCGAGC GCCAGGGCGA TCACACCGGC
GCCCTGCGTC ACCTCGCTAC GTACCGCCGT CTTCAGGCCT CGTGA
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| Protein sequence | MGNAVTYFHH CSTSREAIIA SHERRRSEDE GAPQTQAEFA ADLWYARGYD AELSDPHAAE
AAYACALAHD PYHSAAHANY GRLRHALGDF AAAEEHYRRA LELDPEEPLF WYNLGVVLQD
RDQREQAIVA YRRCLRVAPG FGDAHFNLAG LLERQGDHTG ALRHLATYRR LQAS
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