Gene Hoch_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3246 
Symbol 
ID8545634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4470293 
End bp4471483 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID646387913 
Productdomain of unknown function DUF1745 
Protein accessionYP_003267641 
Protein GI262196432 
COG category[S] Function unknown 
COG ID[COG4398] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.61148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGTGGA CCTCCACCGT GGCCAACACC GCGCATCTCG AGGATGCGCT GGACGAGGCC 
GTCGAACACA TCGACGCGGA TCTGAACGGC GCCGCGCCCG ACCTGATGGT GGCGTTTGCG
CACAACGATT ACGGCGATCA CCTGCAGCGC CTGGTCGAGG TCGTGCGCGA GCGCTACCCC
GGGGTCGTGC TCCTGGGCTG CTCGGCCGAC GGCGTCATCG GCGGCGGCAA CGAGATCGAA
TACCAGCCGG CGCTGTCGCT CACCGCCGCG GTGCTGCCGG GCGTGGAACT CGTGCCCTTT
CATCTCGACG GCGCGCCCGC GAGCTGGCGC TCGCGCATCG GCATGCAGAC CGGCCAGCCG
CCGTCCTTCG TGCTCATCCC CGATCCCTTT AGCTGCCCGG TCGAGGACAC CCTGCGCTGG
TTCGACGCCG TGTATCCCAA CAGCCCCAAG ATCGGCGGCC TGGCCAGCGG CGCCGGCATG
GCGGGCACGA CGACGCTGTT CGCGGGCGGC CATCTGGCGC GCAGCGGCGC GGTCGGCGTG
GCCATGCGCG GCGCGCTCGA GATGCGCACC CTGGTGGCCC AGGGCTGCCG GCCCATCGGC
GCGCCCATGT TCGTCACCCG CCACGATGAG GACGTCGTCT TCGAGCTCGA CGGCCGCCCG
GCCCTGCAGG CCATCGAGGC CACCTTCGCC AGCCTGGCCA GCGCCGACCA GGAGCTGTTC
CGCCACTCGC TGTATCTCGG CGTGGTCACC GACCGCAGCA AGCAGGTCTA CGGCCGCGGC
GATTTCCTGG TGCGCAATAT CCTCGGTGTC GATCCCGAAC TCGGCGCCGT GGCCGTGGAC
GCCGAGCTCG AGGACAACCA GGTGGTCCAG TTCCACCTGC GCGACGCCGC CACCTCGGCC
GCCGATCTCG AACACCTGCT GAGCACCTAC GACGGCCCGC CCCCACGCGG AGCGCTGATG
TTTCCGTGCC TGGGTCGCGG TCAGGCGCTC TACGGCCACG CCAACCACGA CTCGGACGCC
TTCCGCGCCC GCTTCGGCGA GGTGCCGCTG GGCGGCTTCT TCTGCAACGG CGAGATCGGC
CCCTTCGGCG GCCGCACCTT CGTCCACGGC TACACCACCG CCATGGCCCT GTTCTCACCC
TCGCCGTCGC CCTCGTCGCC CTCGTCGCCA GACAGCGACG AGCAGCCCTG A
 
Protein sequence
MQWTSTVANT AHLEDALDEA VEHIDADLNG AAPDLMVAFA HNDYGDHLQR LVEVVRERYP 
GVVLLGCSAD GVIGGGNEIE YQPALSLTAA VLPGVELVPF HLDGAPASWR SRIGMQTGQP
PSFVLIPDPF SCPVEDTLRW FDAVYPNSPK IGGLASGAGM AGTTTLFAGG HLARSGAVGV
AMRGALEMRT LVAQGCRPIG APMFVTRHDE DVVFELDGRP ALQAIEATFA SLASADQELF
RHSLYLGVVT DRSKQVYGRG DFLVRNILGV DPELGAVAVD AELEDNQVVQ FHLRDAATSA
ADLEHLLSTY DGPPPRGALM FPCLGRGQAL YGHANHDSDA FRARFGEVPL GGFFCNGEIG
PFGGRTFVHG YTTAMALFSP SPSPSSPSSP DSDEQP