| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3227 |
|---|
| Symbol | |
|---|
| ID | 8545615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4445148 |
|---|
| End bp | 4446791 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646387894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003267622 |
|---|
| Protein GI | 262196413 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.3502 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCA TGGAACGATG GTTTAACGGA AGTCTCTTGC TCCTCGCGAC AGCCAGCGCG
GGGGCCTGTG GCACGGACGG CCCGAGCGGT CCGGGCACGA TCGGAAGCTC GCCGGCGCCG
CTACCGGCGG CCTCGTGCGA CGCGGTCGCC GGCGGCTCCA CCGAGGTGGC CAAGCCCGAG
CTCATCGCCG AGCTGAGCGA CCGCTATCAC GAGTCGTGGC AGGGCTCGCC GGCCGTGGCC
GATCTCGACG GCGACGGCAG CGTGGAGATC GCGGTGCCGC GCCACAATCG GCTCAACATC
TGGAGCGCCG ACGGCGAGCT GCTGTTCTCG CACTCGGTCG AGGGCCGCAT CTGGGCCGCG
CCGGTGGTAG TCGATCTCCT GCCCGAACGC GACGGTCTCG AGATCGCGGT GGCCGCGCGC
TCGCAGGTGT ACGCCTGGGA CGCCAAAGGC GAGGAGCTGC CCGGCTTCCC GGTCGAGTGG
CGCGACGAGC TGCGCTCGCT GGCCGCGGGC GACATCGACG GCGACGGCCG CTTCGAGCTG
GTCACGGCGA CCACGCGCCG CCTCGAGGAC AACGGCCAGC GCGACCTGCT GATGGCCATC
GAGGCCGACG GCTCGTTCGC GCGCGGCTTT CCGCCCAACA CCAGCGGCGC CTCGGAGTGT
GACGACGCCT GCTACGTGAC CGGCGGCTTC GATCAAAACC TGGCCATCGG CGACCTCGAT
GGCGACGGCG TCGCCGACGT CGCCGCGGTC CAGGACAACG CCTACATCAG CATCCACGAC
GGCACCGGCC GGGCCTTCGA CTGCGCCGAC ATCTTCCGCA AGCGCACCAA GGTCCAGGGC
GTGCGCTTCA TGCTCGACTA CGACGAGGCC CAGCAGGGCT TCGCCGACGA CGAGGACAGC
GCCAACCAGG CCCACTTCAC CAACTCCTCG CCGGCCATCG CCGACATCGA CGGCGACGGC
GAGGCCGAGC TGGTGTTCAC CGGCTCGGTG CAGAACGCCT CGCAGGACGA CCGCGAGCGC
GGCGTGGTGC TGTTCGTGGT CCGCCCCGAC GGCACCCGCC CCGACGACTG GGTCGAGCCC
TACTACGTGC CCGAGTACCG GGCCGGGCTC AACGACTTCG ACGGCACCAA CGTGGTCGGC
CTCAACAACT CGGTCACCGT GGTCGACATC GACCCCGAGC GCGCCGGTCT GGAGATGATC
TTCGCCGACT ACGACGGCCG CATCCACGCG GTCGACGCCC GCGGCGAGCA GCTCTGGACC
TACCGCTACA CCAGCGACGC GCGCGTGCTC ACCGGCGGCG TGGTGGTCTC GGATCTGTCG
CGCGACGGCG TCCCCGAGGT GGTCTTCGCC ACGTACTCGC CCGACCAGAA CAAAGGCGAG
CTGTTCGTGC TCGACGCTGG CGGCAACGAG CTGCACACCC TGTCCCTGCC CACCCGCGGC
GCCATGGGCA TCCCGACCAT CGCCGACGTC GACGGTGACG GCACCCTCGA GATCGTCGTG
AGCCTCAAGG GCAACGAAGA GGACGGCGAG ACCCAGGTCG AGATCTACAC GGTCGCTAGC
TCGGCGCCGA ACTGCATGCC CTGGCCGACC AGCCACGGCA GCCTGCGCCG CGACGGCCTG
GCCCTGCCCA CCGTGACCGA GTAG
|
|---|
| Protein sequence | MLRMERWFNG SLLLLATASA GACGTDGPSG PGTIGSSPAP LPAASCDAVA GGSTEVAKPE
LIAELSDRYH ESWQGSPAVA DLDGDGSVEI AVPRHNRLNI WSADGELLFS HSVEGRIWAA
PVVVDLLPER DGLEIAVAAR SQVYAWDAKG EELPGFPVEW RDELRSLAAG DIDGDGRFEL
VTATTRRLED NGQRDLLMAI EADGSFARGF PPNTSGASEC DDACYVTGGF DQNLAIGDLD
GDGVADVAAV QDNAYISIHD GTGRAFDCAD IFRKRTKVQG VRFMLDYDEA QQGFADDEDS
ANQAHFTNSS PAIADIDGDG EAELVFTGSV QNASQDDRER GVVLFVVRPD GTRPDDWVEP
YYVPEYRAGL NDFDGTNVVG LNNSVTVVDI DPERAGLEMI FADYDGRIHA VDARGEQLWT
YRYTSDARVL TGGVVVSDLS RDGVPEVVFA TYSPDQNKGE LFVLDAGGNE LHTLSLPTRG
AMGIPTIADV DGDGTLEIVV SLKGNEEDGE TQVEIYTVAS SAPNCMPWPT SHGSLRRDGL
ALPTVTE
|
|---|
| |