Gene Hoch_3019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3019 
Symbol 
ID8545407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4176078 
End bp4176620 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content72% 
IMG OID646387691 
Producthypothetical protein 
Protein accessionYP_003267419 
Protein GI262196210 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0143103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.308437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC GAGCGCGCTC GTCCGGCCTC ACCGGCGCCG TGGTCGCGAC CGCGCTCGGC 
CTGGCGCTCG CGGCCTGCGG TGACGATGGC CCGCAGCCGT ACCGCGATGG CGCGTGCTAC
GTGGAGCAGC GCTACGACAT CAGCACGCGC GCGGCCGCGC ACGCCTGTGT GCACGTCGAC
GAGGGACCCT TCGATGACCG CGTGGCCGCG CCCGAGCGCG ACGACGCCGA GGCGCTCACG
CAGAGCCACA CCAACTACAG CGTCGAGCTC GCCGGCGGCA GCGACGAGCG CGCGGGCGGC
GGCTACCTGC GCTTCACCAG CGAGGTGGCA ACCGCCTACT CCTTCTACTT CGACGGCCTG
AGCCCGGTCG AGCTGGTCGC CGCCGATGGC CAGCGACTGT GCCCGGCCAC CCGCCTCGGC
CTCGACGAGT GCGGCGGCCT GGGCCTGGTC GAGGTCCACG AGCTGAATAT CGGACAGACG
GTCTTTATCC GCTTCGGACA GAGCGACGAA GCGAGCGCGA CCGTGATCCT CGAGCGCTAC
TGA
 
Protein sequence
MSTRARSSGL TGAVVATALG LALAACGDDG PQPYRDGACY VEQRYDISTR AAAHACVHVD 
EGPFDDRVAA PERDDAEALT QSHTNYSVEL AGGSDERAGG GYLRFTSEVA TAYSFYFDGL
SPVELVAADG QRLCPATRLG LDECGGLGLV EVHELNIGQT VFIRFGQSDE ASATVILERY