Gene Hoch_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3006 
Symbol 
ID8545394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4162027 
End bp4163220 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID646387678 
Producthypothetical protein 
Protein accessionYP_003267406 
Protein GI262196197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.41999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.506374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCT TCCAGTATCT ATCCAACCCC TTCGAGGGGG ATTTCGTCAC GCTCGCGGCC 
GAGCTCGCGG CGATGCAGTA CCTCACCTTC TGCAAGCGCG CGCGGCGCGT CGGCGCGTCG
GTCGGCCAAC CCGAGGATGC CCTGCTGGAC ACGGTGATCG AGCAGCTCAC CCAGCGCGCG
CCGAGCGCGA CGTACTGGAC CCCGGAGGTG GGCACGATCT TCACCGGCAT CCGGCAGGAA
CCCAGCGCCG AAGTCTACGC CTGGCTGCGC GCCCAGATCG CGCTCAGCGC GCTGGCCACC
GGTGTCCTCG AGCAGGTCTC GCTCGAGCTG GACAGCCAGG CGCCGCTGCT GTTCGCGGGA
CGCACCTTTC CGGCCACGCG GCTGCACATC GAGGGCAGCG CGGCGCAGCT CGAGGTCACG
GCCGCGGACA GCGACGCGGC GTGGAGCTTC TCGCTCGCTG GCCAGCGCGA GGGTGCGCCG
CTCTGGGCCG ACGACGCCGG ACCGGGCGTA TTCCTCGAAC TCGAGGGGGC GCCGGCCGTG
CGCTTCGTCG GCGGAGACTG GCACGCGGCC TGGGGCGAGG AGCCGTGCGC CGCCGTGGTC
GCGAGCGAGA ACCAGCGCGC GCAGTTCAGC GCGGCTCTAG CGCTCCTCCA GCGCACGATG
CCGCACTATT TTCGCTGGGT GACCGCGCTG CTCAAAGAGA TCACGCCCAT GCAGCGGCCG
GGCGAGCACA TGATCGCGAG TAACTCGTCG GCCCTGCGCC TCGGCGGCGT GGACATCGCC
ACGCCAGCGT CGACCACCGA GACCGTCGAG ATGCTCATCC ACGAGTGCTC GCATCAGTAT
TTCCATATGG CGAGCTGGCT CGGAACCACG GTGACCCCGG ACGCTCGTCC GCATTACTCG
CCGCTCAAAC GGCGCGAACG GCCGCTCGAG CGCATCCTGC TCGGGTACCA CGCCTTTGGC
AACGCCCTGA TCGCCTTCGG ACGACTGGTC GAATTAGGCA TGGACCGCGA TATCGACGAG
CGACGGCGCA CGGTGGTCGC GTACATGGAC GAGCTGAAGC TGCCGCTGGC CGACGAAGAC
GGCATCAGCG AACTCGGGCT CGCGCTGTAC CGTCCGCTGC GCGCGCGTCT GGCACCGCAG
AACTCGGCCG AGCTGCCCGC CTACCCGACC ACCGAGCTGC CCGCCGCGCC CTAG
 
Protein sequence
MDVFQYLSNP FEGDFVTLAA ELAAMQYLTF CKRARRVGAS VGQPEDALLD TVIEQLTQRA 
PSATYWTPEV GTIFTGIRQE PSAEVYAWLR AQIALSALAT GVLEQVSLEL DSQAPLLFAG
RTFPATRLHI EGSAAQLEVT AADSDAAWSF SLAGQREGAP LWADDAGPGV FLELEGAPAV
RFVGGDWHAA WGEEPCAAVV ASENQRAQFS AALALLQRTM PHYFRWVTAL LKEITPMQRP
GEHMIASNSS ALRLGGVDIA TPASTTETVE MLIHECSHQY FHMASWLGTT VTPDARPHYS
PLKRRERPLE RILLGYHAFG NALIAFGRLV ELGMDRDIDE RRRTVVAYMD ELKLPLADED
GISELGLALY RPLRARLAPQ NSAELPAYPT TELPAAP