Gene Hoch_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3002 
Symbol 
ID8545390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4157169 
End bp4157603 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID646387674 
Productresponse regulator receiver protein 
Protein accessionYP_003267402 
Protein GI262196193 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.24335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.317219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGG TCGTGGATTT TCTACTCATC GTCGATGATA GTGAGTTCGA CGCCGACATC 
GCCCAGCGCG TGCTGAGGCG AACCGGGCGG TTCAAGCGGG TCGCTATCGC GAGCAACGGG
CGCGAGGCCT TGGCGCTCAT CGACGAATGT ACAGGTGCCC AGGGGCCAGC GCAGATTCCC
CCGCAGGTGA TCCTGCTGGA CATCAACATG CCGTTGATGA ACGGGTTCGA CTTTCTCGAG
CGCTATCAGG ACCGGGACGC GGCCCAGGGA GAGCCCTCGG TGGTGGTCGT CATGCTGACC
TCTTCGAGTT ACGAAGAGGA CCGCGAGCGC GCGATGGCCA AGCCGTGCGT CCGAGATTAC
TTCGTCAAGC CGCTGACCAC GCAGCGCGCC ATCGACCTGG CCGAGCGCTT CGGCAGGCCC
TCGGACGAGG CCTGA
 
Protein sequence
MTKVVDFLLI VDDSEFDADI AQRVLRRTGR FKRVAIASNG REALALIDEC TGAQGPAQIP 
PQVILLDINM PLMNGFDFLE RYQDRDAAQG EPSVVVVMLT SSSYEEDRER AMAKPCVRDY
FVKPLTTQRA IDLAERFGRP SDEA