Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3002 |
Symbol | |
ID | 8545390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4157169 |
End bp | 4157603 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 646387674 |
Product | response regulator receiver protein |
Protein accession | YP_003267402 |
Protein GI | 262196193 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.24335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.317219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAAGG TCGTGGATTT TCTACTCATC GTCGATGATA GTGAGTTCGA CGCCGACATC GCCCAGCGCG TGCTGAGGCG AACCGGGCGG TTCAAGCGGG TCGCTATCGC GAGCAACGGG CGCGAGGCCT TGGCGCTCAT CGACGAATGT ACAGGTGCCC AGGGGCCAGC GCAGATTCCC CCGCAGGTGA TCCTGCTGGA CATCAACATG CCGTTGATGA ACGGGTTCGA CTTTCTCGAG CGCTATCAGG ACCGGGACGC GGCCCAGGGA GAGCCCTCGG TGGTGGTCGT CATGCTGACC TCTTCGAGTT ACGAAGAGGA CCGCGAGCGC GCGATGGCCA AGCCGTGCGT CCGAGATTAC TTCGTCAAGC CGCTGACCAC GCAGCGCGCC ATCGACCTGG CCGAGCGCTT CGGCAGGCCC TCGGACGAGG CCTGA
|
Protein sequence | MTKVVDFLLI VDDSEFDADI AQRVLRRTGR FKRVAIASNG REALALIDEC TGAQGPAQIP PQVILLDINM PLMNGFDFLE RYQDRDAAQG EPSVVVVMLT SSSYEEDRER AMAKPCVRDY FVKPLTTQRA IDLAERFGRP SDEA
|
| |