Gene Hoch_2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2932 
Symbol 
ID8545320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3995036 
End bp3995965 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content75% 
IMG OID646387614 
Productpolysaccharide deacetylase 
Protein accessionYP_003267342 
Protein GI262196133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.44477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGC CGCTCGCCAT CCTCTGCTAC CACCGGGTGG TGCCCGAGGC GACGCGCGGC 
CAGGCCTGGC CGTATTTCGC TCGCGGCACA GCGGTCACGG TCGAGAGCTT CACGCGTCAG
GTCGCCGCGC TGGCCGCGCG CTTCGCGTTT GCGGATGAGG CCTCCGTGCA CGCCTGGGCG
GTCGATGGCG TGCGGCTACG GCGTCCTCAT GTGTGGATGA CCTTCGACGA TGGATATCGC
GATGTGGAAG ACCACGCGGC GCCGGTCTTG TGTGCGGCTG GAGCGCCGGC CACGGTCTTC
GTCACGAGCT GCACGCTGGC CACGCCGCCG CAGGCGCTGG CCGCGGATCG CTGGTACGCG
GCGCTCACCG GAGCCCGACG ACGGCGCGGC TCGCTCGCGC TCGGTCGCGA CCGTTGGCAG
TTCGACCTGA CGCGGCCCCG CGATCGCGCG CGGCTGGTCG ATGGCCCGGA GCGGCGGCGC
TGTCTCGACG CGCCCGCGGC CGAGCGCGAC GCGATTCTGG ACGCGCTGTC CGAGGCGCTG
GACGCGCGCG CCGCACCCGC CAGTGATCTC TATCTGAGCG CGGACGCGCT GCGTCGGCTG
GCCCGGCGGG GCATCGCGCT CGGCGCACAC GGGGCCACGC ACCGACCGCT GCCACGTCTG
CACGATCAGG GCCTGGCGGA CGAGCTCGCC GACATGCAGG CGGCGTTCGC GGCGCACGGG
TTGCCGCGAC CGAGCGCGCT GGCGTACCCC GACGGCGCCT GGAGCGCGTC GGCCGAGGAC
GCGGTCCGGG CCTCGGGGCA CGCGCTGGGT CTGCTCCTGG GTGACGCGCC GGCACGACCC
GAGGCGCTGC GGCTCTCGCG TTATCTGGTC CCGGATCAGC CCGACTGGGT CGAGCGCGTG
CTCGCCCCGG CGCTGGAGGC GGCCGCGTGA
 
Protein sequence
MTSPLAILCY HRVVPEATRG QAWPYFARGT AVTVESFTRQ VAALAARFAF ADEASVHAWA 
VDGVRLRRPH VWMTFDDGYR DVEDHAAPVL CAAGAPATVF VTSCTLATPP QALAADRWYA
ALTGARRRRG SLALGRDRWQ FDLTRPRDRA RLVDGPERRR CLDAPAAERD AILDALSEAL
DARAAPASDL YLSADALRRL ARRGIALGAH GATHRPLPRL HDQGLADELA DMQAAFAAHG
LPRPSALAYP DGAWSASAED AVRASGHALG LLLGDAPARP EALRLSRYLV PDQPDWVERV
LAPALEAAA