| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2905 |
|---|
| Symbol | |
|---|
| ID | 8545293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3958103 |
|---|
| End bp | 3959410 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646387590 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_003267318 |
|---|
| Protein GI | 262196109 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.482411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTA CAAAGACGCA GAAAAATTCG AAGAACGACG TGTGCGAACT CAGCGAGGTG
AGCGCGGTGC TGGGCGGAGA AGAGCTGAGC GCGAAGCAGA AGCGCGCCAA GGCCAAGGAG
ATGGTGGGCG CGCTGATGGG CGACTACAAG GCCGAGGAGC TGCTGAGCCA AGGAGGCCTG
ATGCAGCAAC TGGTGGGCGC GGTGGTGGAG CGCGCGCTGG AGGCAGAGAT GACCGAACAC
CTCGGGTACG CGAAGGGGGA GCGGTCCGGC GGAGGGGGCA ACAGTCGAAA CGGCACCAGT
CGCAAGATGC TCAAGGGCGA CAACGGAGAA TTCCCGATCC AGGTGCCGCG AGACCGGGCG
GGGAGCTTCG CGCCGCAGCT GGTGAAGAAG CATCAGACGC GGCTGCCGGG CTTCGATGAC
AAGATCATCG CGATGTACGC ACGCGGGATG AGCGTGCGCG ACATCCAGGC TCAGCTCGAG
GAGCTGTACG GGGTGGACGT CGGCTCCGAC CTGATCTCGC GAGTGACCGA CAGCGTGCTG
GACGAGGTCA AGGCGTGGCA GGCCAGGCCG CTGGACCCGG TCTACCCCAT CGTCTATCTC
GACGCGCTGG TCGTGAAAGT GCGCGACGGC GGACTGGTCA AGAACAAGCA CGTGTACCTC
GCGCTGGGCG TCAACATGCA GGGCAAGAAG GAGATCCTCG GCATGTGGCT GCAGCGCAGC
GAGGGCGCCA AGTTCTGGCA TCAGGTGCTC ACCGAGCTAC GAAACCGCGG GCTCAAGGAT
ATGCTGATCG TCTGTACCGA TGGCCTCAGC GGCTTCCCTG AGGCCATCGA GGCCGTCTAC
CCAGAGGCCG TGCTGCAGAC CTGTATCGTC CACCTGCTGC GGGCCTCGAT CCGCTACGTG
ACCTGGAAGG ACCGTCGGGC GGTGTTGGCC GACCTCAAGC CGGTCTACAC CGCGCCGACC
GAGGAGGCTG CGCTCGACGC GCTGGTCGCC TTTAATGAGC GCTGGCAGCA CACCTACCCC
ATGATCGGCC AGAGCTGGGA AGCCGCCTGG GAGCGCGTCA TCCCCTTATT TGCCTTTCCG
TCCGAAATAC GGAGAGTCAT CTATACGACG AACGCCATCG AGTCCGTCAA CCGCCAGATT
CGCAAGGTCA TCAAGACCAA GGGACACTTC CCCAACGACG ACGCCGTATT CAAGATCCTC
TTTCTTGCCT TGCACAATGC TTCAAAGAAG TGGACTATGC CCATACGAGA CTGGTCTCGA
GCCCTTCATC AGCTCGCCAT TCTCTTTCCC GGACGATTGT CCGTCTGA
|
|---|
| Protein sequence | MTRTKTQKNS KNDVCELSEV SAVLGGEELS AKQKRAKAKE MVGALMGDYK AEELLSQGGL
MQQLVGAVVE RALEAEMTEH LGYAKGERSG GGGNSRNGTS RKMLKGDNGE FPIQVPRDRA
GSFAPQLVKK HQTRLPGFDD KIIAMYARGM SVRDIQAQLE ELYGVDVGSD LISRVTDSVL
DEVKAWQARP LDPVYPIVYL DALVVKVRDG GLVKNKHVYL ALGVNMQGKK EILGMWLQRS
EGAKFWHQVL TELRNRGLKD MLIVCTDGLS GFPEAIEAVY PEAVLQTCIV HLLRASIRYV
TWKDRRAVLA DLKPVYTAPT EEAALDALVA FNERWQHTYP MIGQSWEAAW ERVIPLFAFP
SEIRRVIYTT NAIESVNRQI RKVIKTKGHF PNDDAVFKIL FLALHNASKK WTMPIRDWSR
ALHQLAILFP GRLSV
|
|---|
| |