| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2743 |
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| Symbol | |
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| ID | 8545130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 3767028 |
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| End bp | 3768638 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646387435 |
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| Product | Spermine synthase |
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| Protein accession | YP_003267164 |
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| Protein GI | 262195955 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.241267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00393215 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACCG ACGCCGCCCC GAGCGCCCGC GCCGACTCGC CCGCCAGCGA GTCTGGTGGC
GAGTCCGCGC CGCAGACGCT GAGCAAGCGC AAGCTCACCG TGCTCGTGGT CGCCGCCTTC
GTCGCCGGCC TGTGCTCGAT CCTCTACGAG CTGCTCATCG GCACCGTGTC CTCGTATTTC
CTGGGCGACA GCGTGCGCCA GTTCTCGATC ACCATCGGCC TGTTCATGGC CGCCATGGGC
ATGGGCGCGT TCTTGGCCCG GAGCCTCGAG GACGACGAGG GCGCCATCGT CGCCCGCTTC
GTCGCGGTCG AGACCGCGCT CGGCCTGATC GGCGGGCTCA GCGTGCCCGT GCTCTACGCC
TGCTTTGGCT ATACCGACCT GTATTACCCG GCCATGGTGG TGTTCATCGT CGCCATCGGC
GTGCTCACCG GGCTCGAGGT GCCGCTGCTG GTGCTGGTGA CCCAGCGCAT GTTTCCGCTG
GCGGTCAACC TGTCCAATAT CCTGTCGCTG GATTATCTGG GCGCGCTGGC GGCCACGCTG
CTGTTTCCCT TCGTGCTGCT GCCGAGTCTG GGCACCTTCC GCAGCGCGCT CGTGGTCGGC
GCCGTCAACC TGGTCACCGC GCTGCTGGTG CGCCGCAGCT TCCGCGATAC GCAGGTGGAC
GGGCCCGCGC GCGGACGCGG CTACGCGGTG GCCGCCGTGC TCGGCCTGGT GCTGCTGGCG
GCCGGCTTTG TCTTTAGCAG CTATCTGCTG GCGCCGTGGC ACGACACCGT GTATCGCGCG
CAGACGATCT ACTCGCGGCA GTCGCCGTAT CAGTCGATCG TGCTCACGCG TTATCGCGGC
GATCTGCGCA TGTACTTGAG CGGACATCTG CAATTCGCCT CGCTGGACGA ATACCGCTAT
CACGAGGCCC TGGTGCATCC GGCCATGGCC GTGGCCCCGC AGCGCGGCAA CGTGCTCCTG
CTGGGCGCCG GCGATGGCCT GGCCGTGCGC GAGCTGCTGG CGTACGACGA CATCGAGCGG
ATTACCCTGG TCGACCTCGA CCCCGCGGTC ACCGACTTGG CGCGCGAGCA TCCGCTCTTG
CGCGAGCTCA ACGGCGACAG CTTGCGCGAT GAGCGCGTGC GCGTGATCGC GGCCGACGCC
TTTTTGTATC TGGACGAGCA GGACGAGCTG TACGACGTCA TCATCGCGGA TTTGCCCGAC
CCGGCGAATG TGTCGCTGGC GCGGCTGTAC AGCCGCGAGT TCTACGGGCT GGTGGCCCAG
CGCCTGGCGC GCACGGGCGT GTACGTGACC CAGGCGTCGA GCCCGTACTA CGCGCAGAAG
GCGTTCTGGA CCATCCGCAA CACCATCGCG GCCGCCGGCT TCGAGACCTG GCCGTATCAC
GCGTACGTGC CCTCGTTTGG CGACTGGGGC TTCGTGATGG CCGCGCGCGC GCCGCTGCGC
CCGGCCGAGG CCGAGATCGC CGTGGACACG CGCTACGTGG ACAGCGCCTC GCTGCCGCGC
CTGTTCGTGT TCGAGCCCGA CGTGCGCGAG GCGCCCGAGC ACGTGAGCAC GCTCGATGAC
CCCAGCGTGC TCAGTGATTA TCTCGAAGCC TGGGGCGCCT GGCGCCGCTG A
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| Protein sequence | MSTDAAPSAR ADSPASESGG ESAPQTLSKR KLTVLVVAAF VAGLCSILYE LLIGTVSSYF
LGDSVRQFSI TIGLFMAAMG MGAFLARSLE DDEGAIVARF VAVETALGLI GGLSVPVLYA
CFGYTDLYYP AMVVFIVAIG VLTGLEVPLL VLVTQRMFPL AVNLSNILSL DYLGALAATL
LFPFVLLPSL GTFRSALVVG AVNLVTALLV RRSFRDTQVD GPARGRGYAV AAVLGLVLLA
AGFVFSSYLL APWHDTVYRA QTIYSRQSPY QSIVLTRYRG DLRMYLSGHL QFASLDEYRY
HEALVHPAMA VAPQRGNVLL LGAGDGLAVR ELLAYDDIER ITLVDLDPAV TDLAREHPLL
RELNGDSLRD ERVRVIAADA FLYLDEQDEL YDVIIADLPD PANVSLARLY SREFYGLVAQ
RLARTGVYVT QASSPYYAQK AFWTIRNTIA AAGFETWPYH AYVPSFGDWG FVMAARAPLR
PAEAEIAVDT RYVDSASLPR LFVFEPDVRE APEHVSTLDD PSVLSDYLEA WGAWRR
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