| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2502 |
|---|
| Symbol | |
|---|
| ID | 8544889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 3446849 |
|---|
| End bp | 3448486 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646387202 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003266931 |
|---|
| Protein GI | 262195722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.233242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACAG CTACCCCCGG CAGCAGCGAT GTCGCCGGCA CCGACGCCGC GGCCGAGCAT
CAGCGGCTCA GCGCCAAGAT CGCCGGCTAC GTGCCCGTGC AGATCACGGC CGATGTCGCG
CATCTCCCCG AGGCCGAGCG CCAGGCGCTC GACGCCCTCA TCGACGCCGC GCGCCTGCTC
GATCCGATTT TCGACCGCCA GGTCTATCTC GGCAACCCGG CGCTGGCCGA GACCCTGGCC
TCGGACCACA CCCCGCTCGG CGAGGCCCGC TACACCTACT TCCGCATCAT GCGCGGCCCC
TGGGACCGGC AGGATCACCT GGCGCCCTTT GCCGTGGACA TGGCGCACCC GCCGGGCGCC
GGCTACTACC CCGAGGATCT CGACGAGGCC GCGCTGCGCG ACTATCTCGC CGCCCACCCC
GAGCAGCGCG AGGCGCTGAT GAGCCCCTAC ACCCTGGTGC GCCGCGACCA GGACGACGCC
GCCGCGCTGG TGGCCGTGCC CTACAGCGAG GCCTACGCGC AGTGGCTCGA GCCCGCGGCC
GAGAAGCTCG AGGAGGCCGC CGCGCTCACC GACAACGACA GCCTGGCGCG CTTTCTGCGC
TCGCGCGCCC AGGCCTTCCG CGATGACGAC TACTACCAAT CGGACAAAGA CTGGATGGAT
CTCGACAGCG CGGTCGAAAT CACCATCGGC CCGTACGAGA CCTACGAGGA CGAGCTGATG
GGGCAGAAGG CCGCCTTCGA GGCCTTTGTC ACCGTGGCCG ACCCCGCCGC CTCGCAGGCG
CTCACCAAGT TCAAGGAGCT GCTGCCGGCC ATGGAGGCCA ACCTGCCGGT GGCCGACGAG
GTCAAGACCC AGCGCGGCGC CGAGAGCCCC ATCCGCGTGG TCGACCTGGT GTTTGCCTCG
GGCGACGCGC GCAGCGCGGT GCAGACCATC GCCTTCAACC TGCCCAACGA CGAGCGCGTG
CGCAAAGAGA AGGGCGCCAA GAAGGTGCTG CTGCGCAACG TCATCAAGAC CAAGTTCGAC
GCCATCATGC AGCCGGTGGG CGAGCGCGTG ATCGCGGCCG ATCAGGTCGC CCTGCTCGAC
GCCGAGGCCT TCTTTCAGGA GACCCTGTTC CACGAGCTGT CGCACAGCCT GGGCCCGGCC
TTCGTCGGCA ACGACGAAGC TGGCGGCGAG GTCAAGGTCG CCCTGGGCGC GAGCTACGCG
GCCCTGGAGG AGGGCAAGGC CGACGTCATG GGCGCCTACA ACGTGCTGTA CATGATCGAC
GAGGGCCACT TCCCGGCCTC GTTCCGCGAC CGGCTGCTGG TCACTTATTT CGCCGGTCTG
TTCCGCAGCG TGCGCTTTGG CGTGGCCGAG GCCCACGGCC AGGGCGCGGC GCTGCAGATC
AACCGCTTCA TCGAGGACGG CGCGGTCACG GCCGACCCCG AGAGCGGCCG CTTCTCGGTC
GACCTGGCCG CGCTGGAGCG CTCGATCGAC ACCCTGGTGC GCGACATGGT CATGTGGCAG
CACAACGGCG ACAAAGCGGC CGTGGATGCC GTGCTGGCGC GACTGGGTGT GCTCACGCCG
GCCATCGAGC GGGCCCTGTC CCAGCTCGAA GACATCCCGG TGGACATCCG TCCGACATAC
CCGCTCGCGG GCGAGTAG
|
|---|
| Protein sequence | MSTATPGSSD VAGTDAAAEH QRLSAKIAGY VPVQITADVA HLPEAERQAL DALIDAARLL
DPIFDRQVYL GNPALAETLA SDHTPLGEAR YTYFRIMRGP WDRQDHLAPF AVDMAHPPGA
GYYPEDLDEA ALRDYLAAHP EQREALMSPY TLVRRDQDDA AALVAVPYSE AYAQWLEPAA
EKLEEAAALT DNDSLARFLR SRAQAFRDDD YYQSDKDWMD LDSAVEITIG PYETYEDELM
GQKAAFEAFV TVADPAASQA LTKFKELLPA MEANLPVADE VKTQRGAESP IRVVDLVFAS
GDARSAVQTI AFNLPNDERV RKEKGAKKVL LRNVIKTKFD AIMQPVGERV IAADQVALLD
AEAFFQETLF HELSHSLGPA FVGNDEAGGE VKVALGASYA ALEEGKADVM GAYNVLYMID
EGHFPASFRD RLLVTYFAGL FRSVRFGVAE AHGQGAALQI NRFIEDGAVT ADPESGRFSV
DLAALERSID TLVRDMVMWQ HNGDKAAVDA VLARLGVLTP AIERALSQLE DIPVDIRPTY
PLAGE
|
|---|
| |