Gene Hoch_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2430 
Symbol 
ID8544816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3357214 
End bp3358080 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID646387129 
Productpantoate/beta-alanine ligase 
Protein accessionYP_003266860 
Protein GI262195651 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.680362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.870169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGCAT CACGCCTCCC CTTCGAGGTC ATCCGCGATC CCGCAACCAT GCGCGCGCGC 
GCCGACGACC TGCGCCGCGA CGGGCTGCGC GTCTGCGTGG TCCCGACCAT GGGCTTCCTG
CATGAGGGAC ACCTGTCCCT TCTGCGCCAG GGCCGCGCAC GCGCCGACGT CGTGATCCTC
ACGCTGTTCG TCAATCCCAC CCAGTTCGGG CCGGGCGAGG ACTTCGACTC CTACCCCCGC
GACGAGGCCG GCGACCTGGC CAAGGCCCGC AGCGCCGGCG CAGATATCGC CTTTTGCCCG
GCCGCCGCGG ACATGTTCGG GCCCGGTTCG CTGAGCGTCG TCGAAGTCGG ACGCCTGGGC
GACCGGCTGT GTGGTGCTGC CCGGCCCGGA CACTTCCGCG GCGTCACCAC CATCGTGACC
AAGCTGTTTC ACCTCACCCG TCCGCATCTG GCGATTTTCG GACAGAAGGA CTATCAGCAG
CTCACCATCC TGCGGCGCAT GAACCGGGAC CTCGATTTCG GCATCGAGAT CCTCGGCGGC
GACATCGTGC GCGAGCCCGA CGGGCTGGCG ATGTCATCGC GCAACGCCTA CCTCAGCGCC
GAGGAGCGGG CGCAGGCGCT GTGCCTGTCG CGCGCGCTGC ACAGCGCACG CGCCTCCTTC
GAGGCCGGTG AGCGCGAGGT CGCCGCGCTG CTCGCGAGCG CGCGCGCGGC CATCGACGCG
GCCACGGGCG TGCGCCTCGA CTACGCCGAG CTGCTCGACG CCACGGAACT CGAGCCCATC
GAGCGCGTGG AGCGCCCGGC CGTGCTCGCG CTCGCGGCCT TTGTCGGTCG CGCCCGGCTC
ATCGACAACA CCGTGCTGGC CCCCTGA
 
Protein sequence
MNASRLPFEV IRDPATMRAR ADDLRRDGLR VCVVPTMGFL HEGHLSLLRQ GRARADVVIL 
TLFVNPTQFG PGEDFDSYPR DEAGDLAKAR SAGADIAFCP AAADMFGPGS LSVVEVGRLG
DRLCGAARPG HFRGVTTIVT KLFHLTRPHL AIFGQKDYQQ LTILRRMNRD LDFGIEILGG
DIVREPDGLA MSSRNAYLSA EERAQALCLS RALHSARASF EAGEREVAAL LASARAAIDA
ATGVRLDYAE LLDATELEPI ERVERPAVLA LAAFVGRARL IDNTVLAP