| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2339 |
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| Symbol | |
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| ID | 8544725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 3248617 |
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| End bp | 3250677 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646387041 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003266772 |
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| Protein GI | 262195563 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.313709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0822836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTGA TCACGACCGA ACGACGCGGT GATATTCTCG TCATCACGTC CGATAACCCG
CCGGTCAACG CCCTGAGCGC GGCGGTGCGG CAAGGCCTCG CCGCCGCCTT CGAGGCCGCC
GAGGCCGACG ACGCCATCGC GGCCCTGGTG CTGTGCTGCC GCGGGCGGAC CTTCTTTGCC
GGCGCCGATA TCACCGAGTT CGGCAAGCCG CCGGTCATGC CGCTGCTGCC GAGCGTGATC
GAGCGCGCCG AGGCGCTGGG CAAGCCCATC GTGGCCGCGA TTCACGGCAC CGCGCTGGGC
GGCGGCTGCG AGCTGGCCCT GGGCTGTCAC TACCGCGTGG CCGTGCCCAC GGCCAAGATC
GGCACGCCCG AGGTCAAGCT GGGTCTGCTG CCGGGCGCCG GTGGCACCCA GCGCCTGCCG
CGCCTGGTTG GCGTCGCGCT GGCGCTCGAG ATGTGCGCGC GCGGCGAGCC CATCTCGGCC
GCGCGCGCGC ACCAGGCTGG TTTGATCGAC CGAGTGGTCG ACACCGACGA CGAAGATGGG
CTGCTCGAGC AAGCGATCGC CTTCGCCGAA GAGATCGCGG CGGTGCGTCC GATTCCGCGC
GTCGGCGAGC GCGAGCTCGC GATCGACAGC GAGGCGCTCG CCGAGACCGT GGCCGCCTTT
CGCGCGGCCA ACGAGCGCCG CTTCCGCGGC TTCGACGCGC CCGAGGCCAA CATCCGCTGC
GTCGAGCGCG CCGCCCAGGT GCCCTTGGCC GAGGGCCTGC AGTACGAGCG CGAGGAGTTC
AGCAAGCTGA GCGAAGGCGA GCAGTCGGCC GCGATGCGCC ATCTGTTCTT CGCCGAGCGC
AAGGCGGCCA AGATCGACGA CCTGCCCGCC GGCATCGAGA CCCGCGCGAT CGCCAGGGTC
GGCATCATCG GCGCCGGCAC CATGGGCGGC GGCATCGCCA TGAACTTCGT GCAGGCCGGC
GTGCCCGTGA CCCTGGTCGA GACCTCACAG GAGGCGCTCG ATCGCGGCCT GGGCGTGATC
GCCAAAAACT ACCAGCGCAG CGCGGCCAAG GGGCGCTTCA CGCCCGCCCA GGTCGAGTCC
TGGCTGGGTC TGCTCACGGG CACACTCGCG ATCGAGGAGC TGGCCGAGTG CGACCTGATC
ATCGAGGCCG TGTTCGAGGA CATGGCGGTC AAAACACAGA TCTTCGCCAA GCTGGACGAA
ATCGCCAAGC CCGGCGCGAT CCTGGCCACC AATACCAGCT ATCTCGATAT CGACGAGATC
GCGGCTTCGA TCTCGCGGCC CGGCGACGTG CTCGGCACCC ACTTCTTCTC GCCGGCCAAC
GTCATGAAGC TGCTCGAGCT GGTGCGCGGC GCCCGCACCG CGCCCGATGT CCTGGCCACG
GTGATGGCGC TGGCCAAGAA GATCCGCAAG GTCGCCGTGG TCTCGGGTGT GTGTCACGGC
TTCATCGGCA ACCGCATGCT CGAGCCGCGG CAGCGCGAGG CCAGCAAGCT CTTGCTCGAG
GGCGCGACGC CCGAGCAGGT CGACGCCGTG CACGTGGCCT TTGGCATGCC CATGGGGCCG
TTTCAGATGG CCGACCTGGC CGGCGTGGAC ATCGGCTGGC ACCGCGATCC CGAGCGCGTC
GAGAGCGTGC GCGACCAGCT CTGCGCCGAG GGCCGCTGGG GGCAGAAGAA GGGCGCCGGC
TTCTACGACT ACGACGAGCG CCGCCAGCCC TCGCCGTCGC CGCGCGTGGG CGAAATCATC
GCCGAATGGC GCGAGCGGCT CGGCGTCGAG GCGCGCGCGA TCGACGATGA CGAGATCGTC
GCGCGCACGC TGTACCCGAT GGTCAACGAA GGCGCCCGCA TCCTCGCCGA GGGCATCGCC
CAGCGCGCCA GCGATATCGA TGTCGTCTGG GTGTACGGAT ACGGCTGGCC CGTGTATCGC
GGCGGGCCGA TGTTCTGGGC CGACAGCGTG GGCGCGGCGA CCATCGTCGC CGGACTCGAG
CGCTACGCCG AGCGCAGCGG CATCGCGGTC GCGCCGCTGC TGCGCGAAAA GGCCAGCCAG
AAGCAGGGAT TCCGCGACTA G
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| Protein sequence | MSVITTERRG DILVITSDNP PVNALSAAVR QGLAAAFEAA EADDAIAALV LCCRGRTFFA
GADITEFGKP PVMPLLPSVI ERAEALGKPI VAAIHGTALG GGCELALGCH YRVAVPTAKI
GTPEVKLGLL PGAGGTQRLP RLVGVALALE MCARGEPISA ARAHQAGLID RVVDTDDEDG
LLEQAIAFAE EIAAVRPIPR VGERELAIDS EALAETVAAF RAANERRFRG FDAPEANIRC
VERAAQVPLA EGLQYEREEF SKLSEGEQSA AMRHLFFAER KAAKIDDLPA GIETRAIARV
GIIGAGTMGG GIAMNFVQAG VPVTLVETSQ EALDRGLGVI AKNYQRSAAK GRFTPAQVES
WLGLLTGTLA IEELAECDLI IEAVFEDMAV KTQIFAKLDE IAKPGAILAT NTSYLDIDEI
AASISRPGDV LGTHFFSPAN VMKLLELVRG ARTAPDVLAT VMALAKKIRK VAVVSGVCHG
FIGNRMLEPR QREASKLLLE GATPEQVDAV HVAFGMPMGP FQMADLAGVD IGWHRDPERV
ESVRDQLCAE GRWGQKKGAG FYDYDERRQP SPSPRVGEII AEWRERLGVE ARAIDDDEIV
ARTLYPMVNE GARILAEGIA QRASDIDVVW VYGYGWPVYR GGPMFWADSV GAATIVAGLE
RYAERSGIAV APLLREKASQ KQGFRD
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