Gene Hoch_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2217 
Symbol 
ID8544603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3082280 
End bp3083194 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID646386924 
Producthypothetical protein 
Protein accessionYP_003266655 
Protein GI262195446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.529623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.381396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC AACCGCTGTT TCGCCGCTTC CACGACGCCA TCCAGCTCGA AGATCGCAAA 
CAGAACGCCG ATCTGCGCGA TAAGCGCGAG CGCATCAAGA AGCGCCTGCG CGAGAACTTG
CGCCCTCACA CCTTCGAGTC CTTCAACCAG GGCAGCTACG CCATGGGCAC CGGCGTGCGC
CCGCTCAATG GCGACTACGA TATCGACGTC GGCATCGTGT TCAACAAGCT GTACAAGCAG
GAGGTGACGC CGCTCCAGGC CAAGCAGCTC GTGTACGATG CGGTCAAGGA ACACACCGCG
CGCGTCGATT GGAAGAACCC GTGCATCACG GTCTACTACC AGCAGAGCGG CAAGCTCAAG
TACCACGTCG ACCTGGTCGT GTTCGCGCGC GACCGCCACG ATGCGAACAA GCTTTGGCTG
GCGCGGAGCA AGCAGAACGC CGCGCCCGCG CAGCAGGAGT GGCAAGCGGA CGACCGCAAG
GGTTTCATCG CCGCGGTCAA GGACCGCAGC ACCGGCGAGG ACGGCTATCA GTTCCGCCGC
GTCATCCGCT ATCTCAAGCG CTGGGCCGAC CTGCACTTCC CCCACACCGG CCACGCCAAG
CCCTCGGGCT TCGCGCTCAC CGTGGCGGCC GCGTCCTGGT TCCGCGCGCA CTCGCGCAGC
GGCGACTACG ACGACCTGGC CGCCACCTTG AACCTGGTCG AGACCATGCG CGGCAGGTTT
TCGTACAACG GCCGGCTGTC GCTGCGTTTC TCCCACGAGC CCCGCGACGA CGTTTTCGGA
CGCATGAACG ACCAGCAGAT GCGCGAATTC TCCCAGCGCC TCGAGGCCCT GGCCGGCTAC
CTCCAGGAGG CCCAGCGCAC CACCCTGGTG GCACCGCTTC GGGATGCCTT CGGCGACGAC
TTTCCCGCAC AATGA
 
Protein sequence
MTLQPLFRRF HDAIQLEDRK QNADLRDKRE RIKKRLRENL RPHTFESFNQ GSYAMGTGVR 
PLNGDYDIDV GIVFNKLYKQ EVTPLQAKQL VYDAVKEHTA RVDWKNPCIT VYYQQSGKLK
YHVDLVVFAR DRHDANKLWL ARSKQNAAPA QQEWQADDRK GFIAAVKDRS TGEDGYQFRR
VIRYLKRWAD LHFPHTGHAK PSGFALTVAA ASWFRAHSRS GDYDDLAATL NLVETMRGRF
SYNGRLSLRF SHEPRDDVFG RMNDQQMREF SQRLEALAGY LQEAQRTTLV APLRDAFGDD
FPAQ