Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_2189 |
Symbol | |
ID | 8544575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 3050726 |
End bp | 3051367 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646386896 |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003266627 |
Protein GI | 262195418 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0218623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACT CCGATTGCAA GCTGCTCCGC GTCGGCGAAC TGGCCAAGGC CGCGGGTAAG ACCGTGCGCG CGCTGCACTT GTACGAGGAG CTCGGCCTGC TCGAGCCCGC GGCGCGCAGC GAAGGCGGCT TCCGCCTGTA CCGCCCCGAG GCCAAGGCGC GCATCGCCTG GGTCTCCAAG CTCCAGGCCA TCGGCTTCAA GCTGTCCGAA ATCCAGGAGT TCGTGCGCGG CTTCGAGGAG GCGCCCTCGG CTCGTGAGGC CACCGATCGC GCGCGCCAGG TGTTCGCCGA CAAGCTCGCC GACATCCGCG AGCAGATCGC GCGTCTGCAG AGCATCGAGT CCGATATCGT CGCGTCGCTC GGCTACCTCG ACGCCTGCCA GGACTGCTCA CCCGAGTACT CGCCGCGCGA GTGCCACCTG TGCACCCACC AGGGCCACGA GCGCGGCTCG GCGCCGCTGC TCTTCGCCAA CCTCACCTGC ACAGCCGAGG GCCCCTGCCT GCCGCACGGG GATGTCGCTC GCGACGCGGA CGGTGAGGAC TACGACGTCG CGCTCTCCGA CCTGCAGCGC GGCGAGGGCG AGGGCGCCGA AGCCGGCGGC AGCGGCAGTC GCGAAGAGGG CAGCATCGAC GGAGCCCGCT GA
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Protein sequence | MSDSDCKLLR VGELAKAAGK TVRALHLYEE LGLLEPAARS EGGFRLYRPE AKARIAWVSK LQAIGFKLSE IQEFVRGFEE APSAREATDR ARQVFADKLA DIREQIARLQ SIESDIVASL GYLDACQDCS PEYSPRECHL CTHQGHERGS APLLFANLTC TAEGPCLPHG DVARDADGED YDVALSDLQR GEGEGAEAGG SGSREEGSID GAR
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