Gene Hoch_2189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2189 
Symbol 
ID8544575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp3050726 
End bp3051367 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID646386896 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003266627 
Protein GI262195418 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0218623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CCGATTGCAA GCTGCTCCGC GTCGGCGAAC TGGCCAAGGC CGCGGGTAAG 
ACCGTGCGCG CGCTGCACTT GTACGAGGAG CTCGGCCTGC TCGAGCCCGC GGCGCGCAGC
GAAGGCGGCT TCCGCCTGTA CCGCCCCGAG GCCAAGGCGC GCATCGCCTG GGTCTCCAAG
CTCCAGGCCA TCGGCTTCAA GCTGTCCGAA ATCCAGGAGT TCGTGCGCGG CTTCGAGGAG
GCGCCCTCGG CTCGTGAGGC CACCGATCGC GCGCGCCAGG TGTTCGCCGA CAAGCTCGCC
GACATCCGCG AGCAGATCGC GCGTCTGCAG AGCATCGAGT CCGATATCGT CGCGTCGCTC
GGCTACCTCG ACGCCTGCCA GGACTGCTCA CCCGAGTACT CGCCGCGCGA GTGCCACCTG
TGCACCCACC AGGGCCACGA GCGCGGCTCG GCGCCGCTGC TCTTCGCCAA CCTCACCTGC
ACAGCCGAGG GCCCCTGCCT GCCGCACGGG GATGTCGCTC GCGACGCGGA CGGTGAGGAC
TACGACGTCG CGCTCTCCGA CCTGCAGCGC GGCGAGGGCG AGGGCGCCGA AGCCGGCGGC
AGCGGCAGTC GCGAAGAGGG CAGCATCGAC GGAGCCCGCT GA
 
Protein sequence
MSDSDCKLLR VGELAKAAGK TVRALHLYEE LGLLEPAARS EGGFRLYRPE AKARIAWVSK 
LQAIGFKLSE IQEFVRGFEE APSAREATDR ARQVFADKLA DIREQIARLQ SIESDIVASL
GYLDACQDCS PEYSPRECHL CTHQGHERGS APLLFANLTC TAEGPCLPHG DVARDADGED
YDVALSDLQR GEGEGAEAGG SGSREEGSID GAR