| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2121 |
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| Symbol | |
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| ID | 8544507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2941537 |
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| End bp | 2942385 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646386828 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003266559 |
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| Protein GI | 262195350 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0891264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.29276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CTCCCACTGC GGCATCTCAG CACATCTTCG CGCCCGGCCT GTTCCGCGGT
CAGCGCGTCA TCGTCACCGG CGGCGGCTCG GGCATCGGCC TGGCGAGCGC GCGCGCGTTC
GCGCGTCTGG GAGCGCGCGT GGCCATCTGC GGCCGCGACG AGGACAAGCT CGCAGCCGCG
CGCGACGAGC TGCAAGCCGT GGCCGACGAA GCTCGCGCCG CCGCCGCCGA GGCCGACAGC
GAAGGCGAGA TGGTCTACGC CGCACCCTGC GATATCCGCT CGGCCGAGAC GGTCGAGGGC
TTCGTCGGCG CGGTGCGCGA GCGCTTTGGC GGCATCGACG TGCTGTTCAA CAACGCCGGC
GGTCAGTTCG CATCACCGGC CACGGGCATC TCGCCCAAGG GCTTCGCCGC GGTGGTTCGC
AATAACCTCG AGGGCACCTA TTACATGACC CACGCGGTCG CCACGCAGGC CATGATCCCG
CAGCGCGGCG GTTGTATCGT CAACATGAGC GCCAACGTGT ATCGTGGCTT CCCCGGCATG
GTGCACACCG GAGCCGCGCG CGCCGGGGTC GAGAACATGA CCATGACGCT GGCGGTCGAG
TGGGCCAGCT ACGGCATCCG CATCAACGCG GTGGCCCCGG GCATCATCCT GTCGTCGGGG
ACCGATCAGT ACCCGCCCGC GATCCTGTCG CGCGCGCTGT CGCAGGTGCC GATCGCGCGC
GGCGGCACGG TCGAGGAGGT GGCCGCGGCC GTGGTATTCC TGGCCTCGCC CGCAGCCCAG
TACATCTCCG GGGTGTCGCT GCGCATCGAC GGCGGCATCA GCCTCAGCGG CGAGATGTTT
CCCCGCTGA
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| Protein sequence | MNDTPTAASQ HIFAPGLFRG QRVIVTGGGS GIGLASARAF ARLGARVAIC GRDEDKLAAA
RDELQAVADE ARAAAAEADS EGEMVYAAPC DIRSAETVEG FVGAVRERFG GIDVLFNNAG
GQFASPATGI SPKGFAAVVR NNLEGTYYMT HAVATQAMIP QRGGCIVNMS ANVYRGFPGM
VHTGAARAGV ENMTMTLAVE WASYGIRINA VAPGIILSSG TDQYPPAILS RALSQVPIAR
GGTVEEVAAA VVFLASPAAQ YISGVSLRID GGISLSGEMF PR
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