| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_2079 |
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| Symbol | |
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| ID | 8544461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2876873 |
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| End bp | 2878402 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646386782 |
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| Product | putative sensor with HAMP domain protein |
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| Protein accession | YP_003266517 |
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| Protein GI | 262195308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGA AGAGGACCTG GAGCTGGCGC ACGCGCCTGC TCGTGCTGCT GCTTCTGTTC
GCGGTGGTGC CGGTTACCGG CATCACCCTG TGGAACCTGG CCCAGCTCGA GGCGGCCTTC
GAGGAAGACG CGGTCGAGTC GCTGCGCGCC ATCGGCTACG CGCGCGCCGA CGCCATCGAC
CAGCTCATGG ACGACCGCCG CCGCGATGTC GAGCTGCTGG CGTCGCAGCT CGTGCCGCAT
CTCGAACAGA TGGGCATGGC CAATCGCGAG GCCGAGGCGC TGGAGCCGCC GGAGACCGCG
CCGGCACCGC TGCCGGCGCC ACTGCCCGAG CTTGAAGACG CCCAGGGTGG CGAGCCTTTT
GCCCCGACCG CGACCGAGAC CCCGGAGGCG GGCGCGTCGC CCGAGGCGGA TGCGGGCGCG
GCGGAGAGCG GCGAGGGCGC GGCGGAGAGC GGCGAGGGCG CGGCGGAGAG CGGTGAGGGC
GCGGGCGCGT CGCGGCCCCA GGCGTCGGCG CGTGCGGTCG AGATCGAGGA GGCGCGCCGG
CAGCAGGCGG TCGCAGCCGA GGCCGAGGCC AAGGCCGAGC TGTACCAGGC GCTGGCGCTG
ATTCTGCTCG ACCAGAAGGT CTTCGAGGAG CTGTTGGTCA TCTCCGAGGA CGGTCTGGTG
GTGGCGTCGA CCTACAACCG CCACGAGGGC AAGACCGCCG ACGGCCTGGA GTACTTTCAG
AACGGGCTCA AGGCGACCTT CCTGCAGCCG ATCTTCCTGT CGCCGATCAC CGACCGCTTG
ACCATGGTGA TCTCGACGCC GATCCGGGCG CCCGACACGC GGGTGCTGGG CGTGTTGGCC
GCGCGCCTCA ACCTCACTCG CTTCTTCCGC TTGATCAACG ATCTCACCGG CCTGGGCGAG
ACCGGCGAGA TCGTGGTCGG CAAGTTCAGC GAGGGCAAGG TGGTGTTCAT GGCGCCGACG
CGGCTCGACG CCAACGCCGC CCTGCAGCGC ACGGTGGAGA TCGGTAGCAA GCAAGGGCGG
CCGCTGCAGG AGGCCGCGCG CGGGCTCAAG GGCTCGGGCG AGCACGAGCT CGACTACCGC
GGCGTCGAGG TGATCGCGGC CTGGCAGCCG GTGCCCTCGC TGAGCTGGGG CCTGGTGGTC
AAGATCGACT ACGAGGAGGC GATGGACCCG GTGCACGCGG TGGCCTCGCA GACCCTGCTG
GTGGCGCTGG GCCTGCTGCT GATGGCCGTG ATCGCGGCCT ACGCGGTGTC GCGCGAGCTG
GTGCGGCCGC TGCGCACGCT CAAGGACGCG GTCGACCACA TCAGCCGCGG TCACCTCGAC
GTGCAGCTCG AGATCCGCTC GAGCGACGAG ATCGGCGAAC TCGCCGACAG CTTCGAGCGC
ATGGTGGCCG CGATCAAGTA CTTCCGCGAG CACGCGCGGC GCGAGGAAGA GGATGAGTCC
GAATTCGATT CCACCGATCA CGAGAGCGAC AGCGGCAGCG ACAAATCGGC TCTGACGCGC
TCCTCGGACG ACGAACCTGC GGCATCATAA
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| Protein sequence | MKVKRTWSWR TRLLVLLLLF AVVPVTGITL WNLAQLEAAF EEDAVESLRA IGYARADAID
QLMDDRRRDV ELLASQLVPH LEQMGMANRE AEALEPPETA PAPLPAPLPE LEDAQGGEPF
APTATETPEA GASPEADAGA AESGEGAAES GEGAAESGEG AGASRPQASA RAVEIEEARR
QQAVAAEAEA KAELYQALAL ILLDQKVFEE LLVISEDGLV VASTYNRHEG KTADGLEYFQ
NGLKATFLQP IFLSPITDRL TMVISTPIRA PDTRVLGVLA ARLNLTRFFR LINDLTGLGE
TGEIVVGKFS EGKVVFMAPT RLDANAALQR TVEIGSKQGR PLQEAARGLK GSGEHELDYR
GVEVIAAWQP VPSLSWGLVV KIDYEEAMDP VHAVASQTLL VALGLLLMAV IAAYAVSREL
VRPLRTLKDA VDHISRGHLD VQLEIRSSDE IGELADSFER MVAAIKYFRE HARREEEDES
EFDSTDHESD SGSDKSALTR SSDDEPAAS
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