Gene Hoch_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2034 
Symbol 
ID8544416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2804367 
End bp2805410 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID646386737 
ProductNMT1/THI5 like domain protein 
Protein accessionYP_003266472 
Protein GI262195263 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.599976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.2602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTGC TGGCGCTGGC CACCGCGTTG GCGGCGCCCG GGTGCAAGAG CTCGGAGTCC 
GGTGGCTCGG CCGAGTCTGC GGACAAGGGC AGCGAGGCGG GCGAGGGCGC AGCGGGCGCG
GCCAAGAGCG CGGCCAAGAC CGAGGCCAAG ACCGAGGCGG TGACGCTGCA GCTCAACTGG
GTGCCCGAAC CCGAGTTCGG CGGCTTCTAC GCGGCCAAAC ACAGCGGCGG CTACGAGCGC
GCCGGGCTCG ATGTCGACAT CGTGGCCGGC GGCGCCGGCG TGCCGACCTG GAACATGGTG
GCCGCGGGCA AGGTGCCCTT TGCCATCGCC TCGGGCGCCG AGATCCTGCG CGCGCGGCTG
CAAGATGCGC CCGTGGTGGC CCTGTACGCG GTGTACCAGA CCAATCCGCA GGCGCTGATG
GTGCACGCCG ACAGCCCGGT GGAGTCGCTC GAGGAGGTGT TTCTCTCGGG CGCGATCGAG
CGCGTCATCA TGGTCGCCGG GCTGCCCTAC GTCGAGCATC TGAAGCAGAA GTACGGCTTC
GACAAGGTCG AGATTGCCCA GTATGGCGGC AACCTGTCGC TGTTTTTGCC GGACAAGAAG
GCGGCACAGC AGTGCTTCAT CTTCTCCGAG CCGGTCACGG CCCGAGAGCA GGGCGTGGAG
GTCAAGGCCT TCTCGGTGGC CGAGAGCGGT TTCAACCCCT ACCTGGCCGT GCTCATCACC
AGCGAGGCGC ACATGAAGGA GCACCCCGAG CAGGTCCAGG CCTTCGTCGA GGCTACCCGC
GCAGGCTGGC AGATGTATCT CGAGGATCCC AAGCCGACCA ACGAGTACAT GAAGCAGCAG
GGCGCCTCGA TGAGTATGGA GGCCATGAAT TTCGCGGCCG AGCTGCAGAC GCCGTACATC
GTCTCGGACG AGACCAGCGA GCACTATCTC GGCTACATGA GCGCCGAGCG CTGGAGCGAG
CTGGCGCAAC AACTGCTCGC GCTCGAGGAG ATCGAGTCGA TCCCGGACGT GACGACGCTG
TTCCATAACG CCGCCGCCAG GTGA
 
Protein sequence
MLLLALATAL AAPGCKSSES GGSAESADKG SEAGEGAAGA AKSAAKTEAK TEAVTLQLNW 
VPEPEFGGFY AAKHSGGYER AGLDVDIVAG GAGVPTWNMV AAGKVPFAIA SGAEILRARL
QDAPVVALYA VYQTNPQALM VHADSPVESL EEVFLSGAIE RVIMVAGLPY VEHLKQKYGF
DKVEIAQYGG NLSLFLPDKK AAQQCFIFSE PVTAREQGVE VKAFSVAESG FNPYLAVLIT
SEAHMKEHPE QVQAFVEATR AGWQMYLEDP KPTNEYMKQQ GASMSMEAMN FAAELQTPYI
VSDETSEHYL GYMSAERWSE LAQQLLALEE IESIPDVTTL FHNAAAR