Gene Hoch_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_2012 
Symbol 
ID8544394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2775711 
End bp2777747 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content71% 
IMG OID646386715 
Producthypothetical protein 
Protein accessionYP_003266450 
Protein GI262195241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC TCGCCGTCAC TCTGTGTGCG CTGTTGGCCT GGAGCCTCGG CGCGCCGCTG 
ACGAGCGCTG AGGCGCAGAC GCCGGCGCAG TCACAGACGC CGGCACAGTC GCAGGCGCTG
GCGCAGGCGC TGGCGCAGGC GCGCTCCACC GACGCGGCCG CCTACGCCGA GACCCTGGTC
GCGCGCGCCC GGGCCATGGG GCTGGCCGAC AGCCCGACCT GGCGTCGCCT GGGCCACTGG
AAGCCCTCGG GCTGGTCGCG GCTGTGGTTT CTCGGCCCGC TCAGCGGCTG GTCGAGCGAG
GCCGACGGCG CCGGCTTTTT CCTCGCGCCC GTGGGCAAAA CCTCCCCGGC CGCCGAGCTA
GCGGCCACCT TGCGCGCCTT CGCCGCGCCG ATCCCGGAGG TCGATGACGA GCACCCGCGC
TGCCGGTTCC CGGCCCGCTA TCGCTTCCTG CACCAGGCCC TGAGCATCGA CCCCGCGCGC
ATACCGCAGC CGCGCTGCGC CAAGTACGCC GAGTTTCTGC GCGCGCTCGC GCCCGAAGCC
GTGGTCGTGG TGTTCTCGAG CTACTATCTC GGACAGGCGG CCTCGGCCTT TGGCCACACC
TTCTTTCGCG TCGAGCGGCG CCGCGGCGAC GAGAGCGCCG AGAAGCGCCA GCTCCTCGAC
ACCGGCATCG ATTACTCGGC CGACAACACC ACCTCGAACG CGCTGCTGTA CGCGCTCATG
GGCATGGGCG GCGGCTTTCG CGGCTCGTTC CGCAAGATGC CCTACTACTA CAAGGTCCGC
GAGTACAACG ACTACGAGAG CCGCGACCTC TGGGAGTACC GGCTGGCCCT CGACGACGAA
CAGCTCGCCC GCTTCGTCGC CCACATCTGG GAATTGGGAC ACACGTACTT CGACTACTTC
TACTTCACCG AGAACTGCTC GTATCACATC CTGGGCGCGC TCGAGGTCGC CAACCCGTCG
TGGAATCTGC TCGCGCGGCT CAAGGTCCCG GTGGTGCCGG CCGACACCAT CAAGGTGCTC
GACGAGGTGC CCGGTCTGGT CGCCGAGGTC AGCTACCGGC CCTCGCTCAT GACCCAGTTT
CGCGCGCGCA CCGACGCCAT GAGCGACGCC CAGCGAGCCC AGGTGAGCAC CCTGCACCGC
GAGCCGGACG CCGCCTTTCC CGCGCACATG AGCCGCCGCG AGCGCGTCGA GGTGCTCGAC
GCGGCCGCCG ACCTGGTCGA CATCCTGTCG GCCGAGGACG TGCTCTTGCG CCCCGAATCC
CGCGCCGCCC AGACCAAGCT GCGTTTGCTC GGACGGCGGG CCGAAATGGG CGGCGCCAGC
GCGCCCCTGG ACATCGCGCC GCCGGTGCAC AAGCGCCCCG ATCACGGTCA CGGCACCCGG
CGGCTGTCGC TCGGCGCCGG GTATACGGCC GAGCAGCGCC GGTATCTGTC GCTGGGCTTT
CGCGCCACCC TGCACGACCT CGCCGATCCC AGCGACGGCT ACCCGGAATT GTCGCAGCTC
GAATTTTTGC CCATCGAGCT GCGCGCCTCG CTCGATGAGG ACGCGCGCGT GTGGCTGCAG
CGCGCGGCGC TGGCGCGCAT CGTTCATCTC AACGCCTTCG ACCGCTTCGA CCGCAGCATC
TCGTGGAATG TGGAGCTGGG CGCGCGGCGC ATCGAGGACG CCGGCTGCCC CGGCTGCCTG
GCCGGCGGCG TGTCGGGCGG CGGCGGCCTC ACCGGCGCCT GGCTGGGCGA TCGCGTCGCG
CTCTTCGCCA TGCTCGACAC CCAGCTCCTG TGGTCGCCGG AGCTCGACGG CGTGGCCGCG
GCGCCCGTGC GCGTGGGCGC GGGACCGATG GGCGGCGTGC GCGTGCGCTG GCACCGGCGC
CTGCTCAGCC TGCTCACCGG CTCGTGGACA TGGCTGCCGG GGCAGGAGCC GGGTTCCACG
TGGTCGGTCG ATGGGACCAT GCGCTGGGGT CTGAGCCGCG ATGTGGCCAT CGATCTCACG
CTGGCATCGC ATCCCCGAGA CCTCGACGCC CGCGCCGCGA TCATGCTCTA CTACTGA
 
Protein sequence
MRALAVTLCA LLAWSLGAPL TSAEAQTPAQ SQTPAQSQAL AQALAQARST DAAAYAETLV 
ARARAMGLAD SPTWRRLGHW KPSGWSRLWF LGPLSGWSSE ADGAGFFLAP VGKTSPAAEL
AATLRAFAAP IPEVDDEHPR CRFPARYRFL HQALSIDPAR IPQPRCAKYA EFLRALAPEA
VVVVFSSYYL GQAASAFGHT FFRVERRRGD ESAEKRQLLD TGIDYSADNT TSNALLYALM
GMGGGFRGSF RKMPYYYKVR EYNDYESRDL WEYRLALDDE QLARFVAHIW ELGHTYFDYF
YFTENCSYHI LGALEVANPS WNLLARLKVP VVPADTIKVL DEVPGLVAEV SYRPSLMTQF
RARTDAMSDA QRAQVSTLHR EPDAAFPAHM SRRERVEVLD AAADLVDILS AEDVLLRPES
RAAQTKLRLL GRRAEMGGAS APLDIAPPVH KRPDHGHGTR RLSLGAGYTA EQRRYLSLGF
RATLHDLADP SDGYPELSQL EFLPIELRAS LDEDARVWLQ RAALARIVHL NAFDRFDRSI
SWNVELGARR IEDAGCPGCL AGGVSGGGGL TGAWLGDRVA LFAMLDTQLL WSPELDGVAA
APVRVGAGPM GGVRVRWHRR LLSLLTGSWT WLPGQEPGST WSVDGTMRWG LSRDVAIDLT
LASHPRDLDA RAAIMLYY