Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1979 |
Symbol | |
ID | 8544361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 2732612 |
End bp | 2734024 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646386683 |
Product | response regulator receiver modulated diguanylate cyclase |
Protein accession | YP_003266418 |
Protein GI | 262195209 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.411021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0777218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGAT GTCTGCGGCG CTCCTCGGTG TTGTTGGTGG ACGCCGATCC GGACGTTCTC GAGCGGGTGC GGGATTTCGG ACGGCTGCGC CTGATCGACG TGCACTGCGC GACCACGCCC GAGGAGGCCG AGGCCATGGC CGCCGGCTGG CCCCTCGACG GCGCGTTGCT CAGCGCCTCG GCGGGTTCGC CCGAGCGTCT CCTCGAGCTG GCGCACGCGC TGCACCGCTC GCAGGATGGG GCGCCGCTGC CCTTGGCCTT TGTCTTCGAG GGTGAGAGCG GCCCGCCGGG GGAGGCCGGG AGCGAGAGCG AGGAGGCGAG CGAGCCGGCG AGCGCGCTCG CGTCCCCGGG TGACGCCCAC TGGCCCCGCG CCGGTGTCGA CGCCCGCCGC GCGGCGATTC GCGCCGGCGC CTCGCTGCTG CTGAGCAAGC CGCTGAGCAT GCGCGCCTTT GTCGCCGCCG TGCACGCGCT GGAGAGCCGC GGGCAGCGGC GGCGTGCGCG CATTCTGCTG GCCAGCCACG ACCGCGCGTA CGCGGGCTCG CTGGCCAGCG CGCTGGCCGT GCACGGCATC GAGGTGGCGA ACGCCACGCT GTCGCGCGCG GGCGAGACCT GCGCGGCGCT GGCCGCCGAG CCGGTCGAGC TGCTGCTGCT CGATGGCGGC GAGGTCGGCG GCGAGGCCGG CGGCGTGGGG CTCGACCTGT GCCGCATGCT GCGCGCCAGT GAGGACTACA AGACGCTGCC GGTGATGTGT TTGCTCGGCG ACGCGGGCGA GGATACGCGC GTGGCCTGCT TCGCGGCCGG CGCGGTGGCG TGCATGCCGC GCGCGGTGTC CGAGCGCGAG CTGTTGGCGC GCATCTTCGG CGTGCTCGAG CGCGAGCGGC TGCTCGGCGA AGCCGCCGAG CGCGACGCGC TCACCGGGCT GCTGCTGCGC CACGCGTTCA TCGAACAGCT CGACCTGCGG CTGCGGGTGG CCCAGCGCGA CCACGTGCCG CTGGCCGTGG CCCTCATCGA CATCGACGCG CTCAAGTCGA TCAACGAGGG CTTCGGACGC GCGGCCGTGG ACGGCGCGCT GCGCGTGTTC GGCGAGGTCC TCGAGCGCCG CTACCGGGCC GGTGATCTGC GCGGCCGCTG GGGCGGCGAG GAGTTCGCGC TGGCGCTCAC GCATGAGGAC GCCGGCAGCG CGGCCACGCA CGTCGAACGC ATGCGCTCGG AGCTGGCCGC GCGCCCCTTC GCGGGCGAGG GCGGCAGCTT CCACCTGCGC TTCAGCGCCG GGGTGGCCTC GTACCCGCGC GACGGCCTCA ACCTCGACGA TCTGCTGCGC GTCGCCGACC GCCGGCTGCA CGCGGCCCAC GCGGCCGGCG GCGATCGCAT CGAGCCCGCG GCGCGCGGCG CCGGGCTGTT CGAGGAGCCA TGA
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Protein sequence | MRRCLRRSSV LLVDADPDVL ERVRDFGRLR LIDVHCATTP EEAEAMAAGW PLDGALLSAS AGSPERLLEL AHALHRSQDG APLPLAFVFE GESGPPGEAG SESEEASEPA SALASPGDAH WPRAGVDARR AAIRAGASLL LSKPLSMRAF VAAVHALESR GQRRRARILL ASHDRAYAGS LASALAVHGI EVANATLSRA GETCAALAAE PVELLLLDGG EVGGEAGGVG LDLCRMLRAS EDYKTLPVMC LLGDAGEDTR VACFAAGAVA CMPRAVSERE LLARIFGVLE RERLLGEAAE RDALTGLLLR HAFIEQLDLR LRVAQRDHVP LAVALIDIDA LKSINEGFGR AAVDGALRVF GEVLERRYRA GDLRGRWGGE EFALALTHED AGSAATHVER MRSELAARPF AGEGGSFHLR FSAGVASYPR DGLNLDDLLR VADRRLHAAH AAGGDRIEPA ARGAGLFEEP
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