| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1979 |
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| Symbol | |
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| ID | 8544361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2732612 |
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| End bp | 2734024 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646386683 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_003266418 |
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| Protein GI | 262195209 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.411021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0777218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCGAT GTCTGCGGCG CTCCTCGGTG TTGTTGGTGG ACGCCGATCC GGACGTTCTC
GAGCGGGTGC GGGATTTCGG ACGGCTGCGC CTGATCGACG TGCACTGCGC GACCACGCCC
GAGGAGGCCG AGGCCATGGC CGCCGGCTGG CCCCTCGACG GCGCGTTGCT CAGCGCCTCG
GCGGGTTCGC CCGAGCGTCT CCTCGAGCTG GCGCACGCGC TGCACCGCTC GCAGGATGGG
GCGCCGCTGC CCTTGGCCTT TGTCTTCGAG GGTGAGAGCG GCCCGCCGGG GGAGGCCGGG
AGCGAGAGCG AGGAGGCGAG CGAGCCGGCG AGCGCGCTCG CGTCCCCGGG TGACGCCCAC
TGGCCCCGCG CCGGTGTCGA CGCCCGCCGC GCGGCGATTC GCGCCGGCGC CTCGCTGCTG
CTGAGCAAGC CGCTGAGCAT GCGCGCCTTT GTCGCCGCCG TGCACGCGCT GGAGAGCCGC
GGGCAGCGGC GGCGTGCGCG CATTCTGCTG GCCAGCCACG ACCGCGCGTA CGCGGGCTCG
CTGGCCAGCG CGCTGGCCGT GCACGGCATC GAGGTGGCGA ACGCCACGCT GTCGCGCGCG
GGCGAGACCT GCGCGGCGCT GGCCGCCGAG CCGGTCGAGC TGCTGCTGCT CGATGGCGGC
GAGGTCGGCG GCGAGGCCGG CGGCGTGGGG CTCGACCTGT GCCGCATGCT GCGCGCCAGT
GAGGACTACA AGACGCTGCC GGTGATGTGT TTGCTCGGCG ACGCGGGCGA GGATACGCGC
GTGGCCTGCT TCGCGGCCGG CGCGGTGGCG TGCATGCCGC GCGCGGTGTC CGAGCGCGAG
CTGTTGGCGC GCATCTTCGG CGTGCTCGAG CGCGAGCGGC TGCTCGGCGA AGCCGCCGAG
CGCGACGCGC TCACCGGGCT GCTGCTGCGC CACGCGTTCA TCGAACAGCT CGACCTGCGG
CTGCGGGTGG CCCAGCGCGA CCACGTGCCG CTGGCCGTGG CCCTCATCGA CATCGACGCG
CTCAAGTCGA TCAACGAGGG CTTCGGACGC GCGGCCGTGG ACGGCGCGCT GCGCGTGTTC
GGCGAGGTCC TCGAGCGCCG CTACCGGGCC GGTGATCTGC GCGGCCGCTG GGGCGGCGAG
GAGTTCGCGC TGGCGCTCAC GCATGAGGAC GCCGGCAGCG CGGCCACGCA CGTCGAACGC
ATGCGCTCGG AGCTGGCCGC GCGCCCCTTC GCGGGCGAGG GCGGCAGCTT CCACCTGCGC
TTCAGCGCCG GGGTGGCCTC GTACCCGCGC GACGGCCTCA ACCTCGACGA TCTGCTGCGC
GTCGCCGACC GCCGGCTGCA CGCGGCCCAC GCGGCCGGCG GCGATCGCAT CGAGCCCGCG
GCGCGCGGCG CCGGGCTGTT CGAGGAGCCA TGA
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| Protein sequence | MRRCLRRSSV LLVDADPDVL ERVRDFGRLR LIDVHCATTP EEAEAMAAGW PLDGALLSAS
AGSPERLLEL AHALHRSQDG APLPLAFVFE GESGPPGEAG SESEEASEPA SALASPGDAH
WPRAGVDARR AAIRAGASLL LSKPLSMRAF VAAVHALESR GQRRRARILL ASHDRAYAGS
LASALAVHGI EVANATLSRA GETCAALAAE PVELLLLDGG EVGGEAGGVG LDLCRMLRAS
EDYKTLPVMC LLGDAGEDTR VACFAAGAVA CMPRAVSERE LLARIFGVLE RERLLGEAAE
RDALTGLLLR HAFIEQLDLR LRVAQRDHVP LAVALIDIDA LKSINEGFGR AAVDGALRVF
GEVLERRYRA GDLRGRWGGE EFALALTHED AGSAATHVER MRSELAARPF AGEGGSFHLR
FSAGVASYPR DGLNLDDLLR VADRRLHAAH AAGGDRIEPA ARGAGLFEEP
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