| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1958 |
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| Symbol | |
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| ID | 8544340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 2700426 |
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| End bp | 2702438 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646386662 |
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| Product | 5'-Nucleotidase domain protein |
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| Protein accession | YP_003266397 |
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| Protein GI | 262195188 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.30927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0638296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGAA TCTTTCGCCC CCTCCCCGCC CTCACCCTCG CCGCCATCGC CTCGCTCGGC
GCCGCGGCCT GCGGCGACAA CCTCGGGGAG CCCGACCCCG ACGAGCCCAT GCCCCAGCCT
CCCGCCGCGC CCGCGACCAT CGAGCTGCGC CTGCTCGAGA CCACCGACCT GCACATGCAC
CTGGCCGATT ACGACTACTA CCAGGACGCG CAGAACGACA CCGTCGGCCT GGCCAACACC
GCCTCGCTGA TCGTCACCGC CCGCGCCGAG GTCGCCAACA GCCTGCTGGT CGACAACGGC
GACCTCATCC AGGGCAACCC GCTCGGCGAC TACATCGCCC GCGAGCAGGG CCTCGCAGAC
GGCGCCGTAC ACCCCGTGTA CAAGGCCATG AACCTGCTCG ACTACGACGT CGGCAACATC
GGCAACCACG AGTTCAACTA CGGCCTGCCC TTCCTCGAGG ACAGCCTGGC CGGCGCCGCG
TTTCCGTACA TCTCGGCCAA CGTCTTCGAC GCCGCCGACG ACAGCCAGCC CTACTTCCAG
CCGTACATCA TCCTCGACCG GAGCTTTGTC GACACCGACG GTCAGAGCCA CGAGCTCAAG
GTCGGCTTCA TCGGCTTCGT GCCGCCGCAG ATCATGATCT GGGACCGCTC CCACCTCGAG
GGCAAAGTCG TCGCCAAGGA CATGGTCGCC ATGGCCGAGC GCTACGTGCC CGAGATGCAG
GAGGCCGGCG CCGACATCAT CATCGCCATC CCGCACTCGG GCATCAACGC CCAGCCGGCC
GAGGGCGACG ACGAGAACGC CGTCTACTAC CTCGCCGACG TGCCCGGCAT CGACGCCATC
CTGTTTGGCC ACTCGCACCG CGTATTCCCC AGCCCCGACT ACGAGGGCGT CGCCGAGATC
GACGTAGCCC AGGGCAAGGT GCGCGGCGTG CCCGCGGTCA TGGCCGGCTA CTGGGGCAGC
CATCTCGGCG TCATCGACCT CACCCTGGAG CAGCGCGACG GCATCTGGAA CGTCATCGAC
TCCAGCTCCG AGGCGCGCCC GATCTCGACC CGTGAAGATG GCCAGGTCGT GTCCCTGGTC
GAGCCCAACG CCGACATCCT CGCCGCCATC AGCAGCGAGC ACCAGGCCAC CCTCGACTGG
ATCCGCCAGC CCATCGGCAC CATCACCGCG CCCGTGCACA GCTTCTTCGC CCGCGTCCAG
GACGACCCCT CCATCCAGAT CGTCACCGAC GCGCAGAAGG CCTACGTCGA GCAGCAGATC
CAGGGCACCG AGCTCGAGGG CCTGCCCGTA TTGTCGGCCG GCGCGCCCTT CAAAGCCGGC
TTTGGCAGCC CCGAGAACTA CACCAACGTG CCCGCCGGTA CCGTGTCGTA TCGCAACATG
GCCGACCTCT ACATCTATCC CAACACGCTC AAGGTCGTGA AGCTCACGGG CGCCGAGGTG
CGCGAGTGGC TCGAGCGCTC GGCCGGCGCC TTCCTGCAGA TCGACCCGTC GTCCGACCAA
GCGCAGCCGC TGCTCAACGA CGAGTTTCCC TCGTACAACT TCGACGTCAT CGACGGCGTG
AGCTACGAGA TCGACATCAC CCAGCCCTCG CGCTACGACC GCGAAGGCGA GCTCGTGGCT
CCCGACGCCC ACCGCATCGT CAACCTGATG TTCGAGGGCG CGCCCATCGC CGAAGACGCC
GAGTTCCTGG TCGCGACCAA CAACTATCGC GCTGGCGGCG GCGGCAACTT CCCCGGGCTC
AGCGGTGACA AGATCGTCAT CGACGCGCCG GACGAAAACC GCCAGGTGCT GGCCAACTAC
ATCGCCGACA GCGATCAGAT CGACCCGCGC GCCGACGCCA ACTGGCGCTT CAAGCCCATC
GAGGGCGCCA ACGCGAATCT CACCGTCACC TTCGAGACCT CGCCGAGCGC GCGCGACTTC
GCCGCGGAGT TCCCGCTGCT CGAGCGCCTG AGCGATACGC CCAACGAAGA CGGCTACGAC
GTCTACCGCT ACCAGCTCGC CGCCGAGGAG TGA
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| Protein sequence | MQGIFRPLPA LTLAAIASLG AAACGDNLGE PDPDEPMPQP PAAPATIELR LLETTDLHMH
LADYDYYQDA QNDTVGLANT ASLIVTARAE VANSLLVDNG DLIQGNPLGD YIAREQGLAD
GAVHPVYKAM NLLDYDVGNI GNHEFNYGLP FLEDSLAGAA FPYISANVFD AADDSQPYFQ
PYIILDRSFV DTDGQSHELK VGFIGFVPPQ IMIWDRSHLE GKVVAKDMVA MAERYVPEMQ
EAGADIIIAI PHSGINAQPA EGDDENAVYY LADVPGIDAI LFGHSHRVFP SPDYEGVAEI
DVAQGKVRGV PAVMAGYWGS HLGVIDLTLE QRDGIWNVID SSSEARPIST REDGQVVSLV
EPNADILAAI SSEHQATLDW IRQPIGTITA PVHSFFARVQ DDPSIQIVTD AQKAYVEQQI
QGTELEGLPV LSAGAPFKAG FGSPENYTNV PAGTVSYRNM ADLYIYPNTL KVVKLTGAEV
REWLERSAGA FLQIDPSSDQ AQPLLNDEFP SYNFDVIDGV SYEIDITQPS RYDREGELVA
PDAHRIVNLM FEGAPIAEDA EFLVATNNYR AGGGGNFPGL SGDKIVIDAP DENRQVLANY
IADSDQIDPR ADANWRFKPI EGANANLTVT FETSPSARDF AAEFPLLERL SDTPNEDGYD
VYRYQLAAEE
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