Gene Hoch_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1952 
Symbol 
ID8544334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp2689322 
End bp2691448 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content72% 
IMG OID646386656 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003266391 
Protein GI262195182 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0523217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG CCTCGACGAA CACCAAGAAG CCCAGCCGGC ACGCGCGCCG CGCGCCCGCG 
ACCATCGCGC GCGCCGTGGC GCTGCGCATC TACATCGCCG GCGCGGTCCT CTCGCTGCTG
TTCGCCGGCA TCACCTACCG CGCCTACGGG CTGCAAGTCG GACAGGCGGA CAAATACCGC
AAGCAGGCCC GCCGGCAGCA CCTGCGCATG GTCGAGATCC CGGCGCCGCG CGGCCCCATC
CTCGACATCA AGGGCCGCGA GCTGGCGGTG ACCGCGGACG CCGACTCGGT GTACGCCAAC
CCGCGCGAGG TGGTCGATCT CGCGACCACG GCCGAGGTCC TGGCGCGCGT GCTCGGGCTC
GACGTGCGCG CGCTCGAGGC CAAGCTGGCC ACGCGCAGGC ACTTCGTGTG GATCGAGCGC
CACGTCACCG CCGAGGAGGC GCGCCAGCTC CGCGAGGCCG ATCTCTCGGG CATCTACTTC
ACGCCCGAGC CGCGGCGCTA CTACCCTGGC AAGGAGCTGG CCGGGCCGGT CATCGGCTTC
GCCGGCATCG ACGGCAACGG CCTCGACGGC ATCGAGCTGC GCATGGATGA ACTATTGGTG
GGCGAGAAGG CGCGCTTTGC CGCGCTGCGC GACGCCGCCG GACGCACCAT GATGGCCGAC
GGCGTGGTCG CGGCCGAGGC CGGGCACACG GTCACGCTCA CCATCGACCG CTCGGTGCAG
CACATCGCCG AGGCCGCGCT GGCCGATGTC GTGGTCGAGA ACCAGGCCAA GGCCGGCTCC
ATCGTGGTCC TCGACGTGGC CACCGCCGGT GTGCTGGCCA TGGCCAACTG GCCCAACTAC
GACCCCAACG CGCCCGGCAG CGGCATCGCG GCCAAAGCGC GCAACCGCGC GGTCACCGAC
GCCTTCGAGA TCGGCTCGAT CATGAAGGTG TTCACCGTGG CCGCGGCCCT CGACGCCGGC
GCGGTCACGC CCGAGCAGGA GTTCGACGTC GGCGGCGGCG TGCTGCAGAT CGGCCGCAAG
GTCATCCGCG ACACCTACCG CGACGAGGTC CTCGACGTCG GCGGCATCCT CAAGCGCTCG
TCCAACGTCG GCGTGGTCCA CGTGGTCCGC GAGCTCGGCG CCGACGGCCT GTTCGAGGGC
CTCAAGCGCT ACGGATTCGG ACGCTCGACC GGGATCGAGC TGCCGGGTGA GCGCTCCGGC
AAGCTGCGCT CGCCCAAGCG CTGGGGCGAG CTGGGGCTGG CGTCCATGGC CTTTGGCTAC
GGCATGACGG CGACCGCGCT GCAGATCGCG GCCGGCTTCG CCACGGTCGG CGCCGACGGC
GTGTACCGCG AGCCGCGCGT CATCCACGAC GTGCGCGACT CGCTCGGCCA GGTGCTGTAC
GAAAACGCGC CCACGCCGCA CCAGGCCATG CGCCCCGAGA CCGCGCGCGC GCTGCGGCCC
ATGCTGGCCA CGGTGTTCGA CAAGGGCCGC GACGGCGGTA CCGCGCGTTC GTTGGATCCG
CCGCCGTTCT CGGTCGGCGC CAAGACCGGC ACCTCGCGCA AGGTCGACCC CGAGACCCGC
GAGTACAGCG CCAAGCTGCA CGTGTCCTCG TTCGCCGGCC TGGCGCCCAT CGACGAGCCG
CGCATCGCCG TGGTCGTGAT CGTCGACGAG CCCGGCGGCG AGCACTACTA CGGCGCCCAG
GTCGCCGGGC CCGCGTTCGT ACGCGTGGTC GACGAAACCC TGCGCTACAT GGGCCTGCCG
CCCGAGGCCG CGGTGGCTGA GGCGTCGGAC CGTTTCGCCA GCCCCGAGCT GGCGCCGCGC
GACTACGACG AGGTCAACGA CTCGCTCGGC GAGGTCGCGC GCGCCAGCGG CACCAGTGAC
GACGATCTGT TCGCCGAGCG GCTCACCGAC GACTTCGAGG ACACCGGCTG GCTCGGCCCG
GAGTGGGTCA ACGTACCCGA CTTCCGCCGT CTGGGTGTGG CCCAGGCCGT GGCGCTTGCC
GGCGAGAGCG GGGTGGCCCT GGAGATCGAT GGTTCGGGGC GCGCGGTCGA GCAATATCCC
CCGCCGGGAC CGGCCAAACG CCCGGTGAAC TGCCGGGTGG TGTTCTCGCC CATGCATCAC
GCGCATGCCG TCAGCACCGC AGAATGA
 
Protein sequence
MSSASTNTKK PSRHARRAPA TIARAVALRI YIAGAVLSLL FAGITYRAYG LQVGQADKYR 
KQARRQHLRM VEIPAPRGPI LDIKGRELAV TADADSVYAN PREVVDLATT AEVLARVLGL
DVRALEAKLA TRRHFVWIER HVTAEEARQL READLSGIYF TPEPRRYYPG KELAGPVIGF
AGIDGNGLDG IELRMDELLV GEKARFAALR DAAGRTMMAD GVVAAEAGHT VTLTIDRSVQ
HIAEAALADV VVENQAKAGS IVVLDVATAG VLAMANWPNY DPNAPGSGIA AKARNRAVTD
AFEIGSIMKV FTVAAALDAG AVTPEQEFDV GGGVLQIGRK VIRDTYRDEV LDVGGILKRS
SNVGVVHVVR ELGADGLFEG LKRYGFGRST GIELPGERSG KLRSPKRWGE LGLASMAFGY
GMTATALQIA AGFATVGADG VYREPRVIHD VRDSLGQVLY ENAPTPHQAM RPETARALRP
MLATVFDKGR DGGTARSLDP PPFSVGAKTG TSRKVDPETR EYSAKLHVSS FAGLAPIDEP
RIAVVVIVDE PGGEHYYGAQ VAGPAFVRVV DETLRYMGLP PEAAVAEASD RFASPELAPR
DYDEVNDSLG EVARASGTSD DDLFAERLTD DFEDTGWLGP EWVNVPDFRR LGVAQAVALA
GESGVALEID GSGRAVEQYP PPGPAKRPVN CRVVFSPMHH AHAVSTAE