| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1913 |
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| Symbol | |
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| ID | 8544295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 2629479 |
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| End bp | 2631050 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646386618 |
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| Product | protein of unknown function DUF1058 |
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| Protein accession | YP_003266353 |
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| Protein GI | 262195144 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3103] SH3 domain protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0257561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT TCAAACACAT CTTCTTCTGC GTCGGTCTGG TCTTGGTTCT CGCGACCGGG
CAGGCTCACG CGGAGAAGGT GTGGACCAAG AGCGAGACCA GTCTGCGCGC CGACCCCGAT
GACGCCAGCT CGCGCGTCGC CCGTATCCAG GGAGATCGCG AGCTCAGCGT CATCGAGAAG
AAGGGCAACT GGTATCGCGT CAAGGTCGGC GTGAAGACCG GATGGATCCG CCGCAGCGAT
CTTCGGGAGC GACCCTCGAG CAACTCCGCG ACAGCGGAGT CTTCATCAGA GTCCGCCGCA
CGGGCGACGG GTTCTGGTGG TGGCTCCGGC GCACGCGCCA ACAAGAACAA CAAGAGCAAC
AAGAACAACC GCCGCAAACG ACGCTCGCGG CGCAACTGCC GCGAGGGCTC GGCGTGGTGC
GACAGCGACG GCGACGCCAT GCGCGTGGTG GTCGTGGTCA ACCGCGTCGA GGCCTACAAA
GAGCCACGCG ACGACGAGGA TATCGCGTTC TTGGCCTCGC AGGACCAGGA GCTCGTGGTC
CTCGGCCATC ACAGCCCCGA TTGGATGTAC GTCCAGACCC TGGACGGCAA GCTGGGGTGG
ATTCACGACG ACACGGTGCG CCAGAAGGGC AACCTGGTGA GCGCGCGCGG CACGGCGATC
GACGCCCCGC GCACGCAGGG CTCGGGGACC GAGTCCGGCA GCGATGGTGA TACCGGCGCT
GAGACCGGCA CGGGAGCGGA CGACGCGGCG CTCTCAGCTT CCGCTTCGGC TTCGGCGAGC
GCGGCCGGCG ACGCCACCCG GGTCACGGCT CGGCGCGGCG AGGGCGAGAG CCTCGAGCCC
GAAGGGCCTT CGCGCTTCGA CGTGCGTCTG TCGATGGGGG CGGGCGCGGC GCTGAGCGGA
CGCGCGCTCA CGGCGACCAG CGGCGAGGCC GGCAACTACG AGACCCGCTC GACCGGGCTG
GTGACCTCGC TGGCCGGCGA TATTCGCTAC GAACTCTCCG GCCCCTGGCA CGTCGGCGTC
GACGGCAACT TCGCGCTGGT TAGCGGACTG GCCGGGCTCG AGTACAACCC CGCGGCGGCC
GGTTCGGTGG AGGCGGGCAA TTATCTGCAC CACCGCACCG AGCTGAGCGC ACAGGTCGGC
TACGAGACCG ATAGCTGGAA TAGCTATCTG CACGTCGGCG GCGCCGTGGG CATCTTCTAT
ATTCAGGACC TGTTCAATGA GGCGGCGCTG CCGCGCGAGC GTCTGCTCAG CCCGCTTGTC
GGGATCAACG CCGATTTCGC GCTGAGTCCC AGCTTCGAGC TCGGCGTGCG AGCCGATGCC
CTGGTGCTGG GCGCGCTGGC GCAGACGCGG GGCCGCGAGG ACGGCACCTT CTCGTCGATG
CTGGCGGTGG CGGCGCAGGC CGAGGGCACC TACAGCCTCT CGGACACGCT CGGGCTGTTG
GCCGCGTTCC GCTTCGATCG CGTGTTCCCC GAGTGGACCG GGGCGTCGGT GCGTGAGGCC
GGGGTCGAAG GCGCCGCTCG CACCGACCAG ATGCTGCGTT TTCTGGTCGG CGTTCAGGCG
CGCTTTCAGT AG
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| Protein sequence | MIAFKHIFFC VGLVLVLATG QAHAEKVWTK SETSLRADPD DASSRVARIQ GDRELSVIEK
KGNWYRVKVG VKTGWIRRSD LRERPSSNSA TAESSSESAA RATGSGGGSG ARANKNNKSN
KNNRRKRRSR RNCREGSAWC DSDGDAMRVV VVVNRVEAYK EPRDDEDIAF LASQDQELVV
LGHHSPDWMY VQTLDGKLGW IHDDTVRQKG NLVSARGTAI DAPRTQGSGT ESGSDGDTGA
ETGTGADDAA LSASASASAS AAGDATRVTA RRGEGESLEP EGPSRFDVRL SMGAGAALSG
RALTATSGEA GNYETRSTGL VTSLAGDIRY ELSGPWHVGV DGNFALVSGL AGLEYNPAAA
GSVEAGNYLH HRTELSAQVG YETDSWNSYL HVGGAVGIFY IQDLFNEAAL PRERLLSPLV
GINADFALSP SFELGVRADA LVLGALAQTR GREDGTFSSM LAVAAQAEGT YSLSDTLGLL
AAFRFDRVFP EWTGASVREA GVEGAARTDQ MLRFLVGVQA RFQ
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