Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_1853 |
Symbol | |
ID | 8544235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 2550987 |
End bp | 2552450 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646386559 |
Product | formiminoglutamate deiminase |
Protein accession | YP_003266294 |
Protein GI | 262195085 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.520971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCGCC TGTTTGCCAG ACGCGCCCTG CTGCCCGAGG GCTGGGCGCG CGATGTCTGT GTGGAGATCG GAGAGGACGG TTGTGCCAGC GCGGTGCGCG CGGGCGCGGC GGCGCCGCCG GATGCCGAGA CGGTGCCCGG GGTGCTGGTG CCCGGCATGC CCAACCTGCA CAGCCACGCG TTTCAGCGCG CCATGGCCGG GCTGGGCGAG CGCGGCCACT TCGCCGCGCC GCCCACGGAG GTGGGCGCGC CCGCGTCTGT GTCCGATGTC GTCCACGCGT CCGACGATGC CGCGGCCCGG GCGGCGGCCG CGCGCGACAG CTTCTGGTCG TGGCGCGAGA CCATGTACGC GTTCGTGGCG CAGCTCTCGC CCGACGACGT CCACGCCATC GCCAGCCAGC TCTTCGTGGA GATGCTGACG GCCGGCTACA CCGGCGTGGC CGAGTTCCAC TATCTGCATC ACGCGCCCGA CGGCCGCCCC TACGCGGATC CCGCGGCCAT GGCCGAGGCA GTGATCGCGG CCGCGCGCGA GACCGGGATC GCGCTCACCC TGCTGCCGGT GCTGTATGTG CACGGCGGTT TCGGCGACCA GCCCGCGGGC CCGGCGCAGC GCCGCTTCGT GCACGCGCCC GACGACTTCG CCGCGCTGCT GCAGCTCCTG GCCACGCGCC ACGCCGGCGC GCCCGGGCTG CGTCTGGGCG TGGCCCCGCA CAGTCTGCGC GCGGTGTCGC CGAGCGCGCT GGCCCGGGTC ATCGCGGCCG GTGACGCGCT CGGCGAGGAC GCGCCGGTTC ACGTCCACGT GGCCGAACAA ATCCGCGAGG TCGAGGACTG CGTGGCCTGG AGCGGTCGCC GGCCGGTGGC CTGGCTGCTC GACCACGCGC CGGTGGGGCC GCGCTGGTGC CTGGTCCACG CCACGCACAT CGACGCCGAC GAGCTGCACG CGCTGGCGCG CTCGGGCGCG GTCGCCGGGC TGTGTCCGAG CACCGAGGCC AATCTCGGCG ACGGGCTGTT TCCATTGGCG GCCTATCTGG AGGCCGGCGG CGCGCTCGGC ATCGGCTCGG ACAGCAACGT GAGCGTGAGC CCGCGCGCCG AGCTGCGGCT GCTCGAGTAC GGCCAGCGGC TGCGGGCGCA GGCGCGCAAT ATCGCGGCCT CGCCGGCGCG ACCGGCGACC GGCGCGCGGC TCTACGCGGC CGCCCTGGAC GGCGGTGCCC GGGCCCTGGG CCAGCCGATG GGCGCCATCG CGCCCGGCCA TCGCGCCGAC TACCTCGCGC TCGACGACGA GCATCCGCTG TTAGTCGGAC GATCGGACGA TCTCGTGCTG GACGCGCTGG TGTTCGCGGG CGAGCACAAT CCGCTGCGCC AGGTCATGGT CGGCGGCGCC TGGGTGGTGC GCGACGGCGC GCACCCGGCC CAGGCCGAGG TCGCCGCGCG CTACCGGCGC GTCATGCGCA AGCTGCTGGG CTGA
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Protein sequence | MQRLFARRAL LPEGWARDVC VEIGEDGCAS AVRAGAAAPP DAETVPGVLV PGMPNLHSHA FQRAMAGLGE RGHFAAPPTE VGAPASVSDV VHASDDAAAR AAAARDSFWS WRETMYAFVA QLSPDDVHAI ASQLFVEMLT AGYTGVAEFH YLHHAPDGRP YADPAAMAEA VIAAARETGI ALTLLPVLYV HGGFGDQPAG PAQRRFVHAP DDFAALLQLL ATRHAGAPGL RLGVAPHSLR AVSPSALARV IAAGDALGED APVHVHVAEQ IREVEDCVAW SGRRPVAWLL DHAPVGPRWC LVHATHIDAD ELHALARSGA VAGLCPSTEA NLGDGLFPLA AYLEAGGALG IGSDSNVSVS PRAELRLLEY GQRLRAQARN IAASPARPAT GARLYAAALD GGARALGQPM GAIAPGHRAD YLALDDEHPL LVGRSDDLVL DALVFAGEHN PLRQVMVGGA WVVRDGAHPA QAEVAARYRR VMRKLLG
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